Gene Shewana3_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0632 
Symbol 
ID4476842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp742284 
End bp743582 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content51% 
IMG OID639725167 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_868276 
Protein GI117919084 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0152776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.082918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAATT CTTCACTACG TAAAGACCTC GCAGAAAGCG AAACCAAACG CAGGGAAGCC 
GAGGCCGTTG TCGATTCAAT CAAGGCGAGT ATCGCGACGA TTGAGTTTAC CCCCGATGGC
ATCATCCTCG ATGCCAATCC CCTGTTTTTG AAGGCTGTAG GCTACTCACT GGACGAGATT
GTCGGTAAAC ACCATAAATT ATTTTGCGCC GAATACTATG TAAATACCTC GGAATATCAA
CAGTTTTGGC GCGAATTAAA GCAAGGACAG GCGAAGGAAG GCAAATTCCC CCGCGTACAC
AAGAATGGTC AAGAGATCTG GCTCAGGGCG ACCTATTTCC CCATCAAGCT GGATGGCAAA
ATCACTAAGA TCATGAAAAC TGCGGCGGTG ATCACCGAGG ATAAATATCA GCTAGATGCT
CAGGCGGCGC TGTTTAGCGC CCTGCAAAAA TCCCAGGCGA TCATCGAGTT CAGCCCCGAG
GGCAATATCC TCAATGCCAA TGCTAACTTC CTCAGAACCA TGGGATATAG CAAGGAGCAA
CTCCAAGGCA AGCATCACCG CCTGTTCTGC TTCGATAACT TCTATCAGGA TAATCCCCAT
TTTTGGGATG ACCTGCGACG TGGGCAATAC AAGAAAGGCC TATTCCAACG TAAAAATGCC
TATGGGGATT CGATTTGGCT TGAGGCCGTC TACAACCCTG TGATGGATGA TCACGGCAAA
GTGGTAAAGG TAATCAAGTT TGCCAGCGAC ATAACCCAGA GAATTATCAA GAGCCATGCG
ATTCGGGATG CGGCCAATAT CGCCCATGCC ACCTCGCAGA GCACGGTTGA ACAGGCTAAC
CGCGGCGTGC AGTTACTCGA TGCGACGGTA AACACCTCAA ACGCGATTGC GGCGCAGACC
CATAAAACCA CAGAGTCTAT GTTGAAACTC AACGAGCAAT CTCAAAGTAT TCAAGCAATT
GTGGCAACAA TCAGTGCCAT TGCCGATCAA ACCAATCTAC TGGCCCTCAA CGCCGCCATC
GAAGCTGCCC GCGCGGGCGA ACAAGGCCGA GGCTTTGCCG TAGTGGCCGA TGAGGTGCGC
CAATTAGCGG CGAGAACCAG TAAATCGACC GGCGAAATCG CCGCTGTGGT CGATAAGAAC
AGCCAACTGA CGGCCAGTGC CACCAGCATG ATGAATGAGG TTGAGCGCAT CGCCGAGGAA
GGCAAACAGC AATTAGCGGA AGTCACCGCC GTGATGGGCG ATATTCGCAC CGGCGCGGAG
AATGTCGCCG AGACAGTCTC GCAACTTTCT ATTGATTAA
 
Protein sequence
MFNSSLRKDL AESETKRREA EAVVDSIKAS IATIEFTPDG IILDANPLFL KAVGYSLDEI 
VGKHHKLFCA EYYVNTSEYQ QFWRELKQGQ AKEGKFPRVH KNGQEIWLRA TYFPIKLDGK
ITKIMKTAAV ITEDKYQLDA QAALFSALQK SQAIIEFSPE GNILNANANF LRTMGYSKEQ
LQGKHHRLFC FDNFYQDNPH FWDDLRRGQY KKGLFQRKNA YGDSIWLEAV YNPVMDDHGK
VVKVIKFASD ITQRIIKSHA IRDAANIAHA TSQSTVEQAN RGVQLLDATV NTSNAIAAQT
HKTTESMLKL NEQSQSIQAI VATISAIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR
QLAARTSKST GEIAAVVDKN SQLTASATSM MNEVERIAEE GKQQLAEVTA VMGDIRTGAE
NVAETVSQLS ID