| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0622 |
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| Symbol | |
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| ID | 4476832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 728053 |
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| End bp | 730560 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639725158 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_868267 |
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| Protein GI | 117919075 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.53674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAATC TACCCATTCA TTCCTTATTG CCATCCCTGC GCGATGCCTT TGCGAAACAT
GCGCAAGTGA TCCTCGAAGC GCCAACGGGT GCGGGTAAAT CGACCGCATT GCCCTTAGCC
ATGCTGGATT GGCCTGAGAT TTCTGGGCGG ATTTTAATGC TGGAACCCAG GCGTGTGGCT
GCCCGTAGCG TGGCGCAATT TATTGCCAGT TGTCGGCAGC AGGCGGTAGG GCAAGAGGTA
GGTTATCGCG TGCGCGGCGA GTCAAAGGTC AGTGGTGAAA CTCGACTTGA GATTGTCACC
GAAGGGATTT TAACTCGCAT GATCCAGCAA GATCCTGAAT TAACAGGCAT CGAGATGATC
ATTTTCGACG AGATCCACGA GCGGCATTTG ACCACAGATC TCGGTTTAGC CTTGGCGCTC
GAAGTGCAAA GCTCGCTGCG GGATGACTTA AAAATCCTCG CCATGTCGGC AACCTTATCT
GGCCTGACAT TGGCCGAGTT GATGCCCGAT GCCGCCCTGC TACAGAGTGA AGGGCGCAGT
TTCCCGGTCG ACATTCGATA TCGTCCCGTT GCTGGGCAGC AGCATTGGCT CGATCATCTG
AGCCGCGTTG TGCTCGATGC CGCGATATCC GTAGGCGATA AGGGGCCACA GGATATTTTA
GTGTTTTTGC CCGGTAAAGC CGAAATCCTC CGAGTGGCGC AGTATCTAGA AGAGCGCCTC
GATAGCAGTC ACGTGGCGGT GTGCCCACTC TATGGCGAGC TATCGGCGCA GGAACAGGAC
AGGGCGATAA AGGCCGACAG CAGCAGGCGC AAAATTGTGC TCTCCACCAA CGTGGCCGAG
TCGAGCTTGA CCATCGAGGG CATTGGCCTT GTTATCGACA GCGGTTATAA ACGCCAAGCC
AGTTTTAATC CTAAAACTGG GGTGACACGT TTAAGCCTTA AGCGCATCAG CCAAGCCTCG
GCAACCCAGC GTGCTGGCCG TGCGGGGCGT TTGGCGGCGG GCGAGTGTAT CCGTTTATGG
GGCCAAGAGG AGCATCAGCG TCTGCTCAAG GCCGATGAAC CCGAAATTAG CCAAGCCGAC
TTAGTCGCCA TGGCCCATGA CTGTGCCTAC TGGGGCGCGA AATCCTTCAG CGACTTACTG
TTATTGACTG CACCGCCCAC GGTAAATGAG GCATTAGCTT GGCAACTGCT TCAGCGTTTA
GGCATGGTCG ATGAACACAA CAAGCTGACT GCGCATGGCA AAGCGGCCTA TGAGCTGGGG
TGTCATCCGC GCCTCGCACA TATGTTATTG GTGGCTAAAT CTCGCGATGA ACATCAACTG
GCGGCCTTAG CCTGTTTACT GGCGGGGATT TTAGAGGCGC GGGGATTGCC ACGCAAAGGC
GCCGATATCA TGAATTATTT GCACTTTGCC ACCCAAGGCA GTGCGGGGCA GCAAGCCAAA
CAATGGCTTA AAAAGCTGGC GCTAGATAAG CAATTTACTC AGGCCGATTT AGTGGCCATC
GCCTCCCATG CCCATCATCA GGATGCCGGT TTGCTGTTGG CGCTGGCTTA TCCTGACCGG
ATTGCCAAAT CCCGTGGCGT TGAGGGGTAT CAATTGGCCA ATGGAACGGG CGTGGTGCTT
AGCGCCGAAG ATGCCTTAGC GCAAACGCCT TGGTTGGTGG TGGCAGATTA TCAAGAAACC
GAAGGCAAGA ATGCCGGGCG GATTTATCTC GCCAGTCCAT TATTGCCAAG TCTGTTCGAT
GAGGAGTTGG CCGAGTTGGT GGAGCGTTAT GACCAATGCG GCTGGGATGA AGCTAAAGGC
CGCGCTGTGG CCGAGCGCCA AACCAAAGTC GGGCAGATTT TACTGAAATC AGAGGCTATT
GCTAATCCGA ATCGCGGCCA AATTGTGGCG GCATTACTGA GTTACATTCG CCAGCAGGGG
TTACAAATCC TCAATTGGCA CGATAACTTA GCGCAGTTTC AGGCTCGATT ACAGTTAGCG
CGCGATTTAG ATCCGAATGC CGATTGGCCG GATATGAGCG ACACCGCGCT GCTGGCAAAC
CTTGAAACAT GGCTGGCGCC CTACCTTGAA AATGTGAATA ATCTGCCGCA ATTACAAAAA
CTCGATTGCT TTAGTTTGCT GGTAAACCAA TTAACTTGGT CACAGCAACA GGCACTCGAT
GCGCTGCTGC CCACCTCATG GCCGTTAGCC ACGGGCACCT TCGCGCCGAT ATTGTACGAT
GCCTCGGGGC GAGCCTTGCT GCGGGTACGT TTGCAGGAAA CCTTTGGCAT GGCAGACAGC
CCGCTACTGG CTCAAGGTAA GCTTAAGGTG ACGATGGAAT TGCTGTCACC GGCGCAGCGC
CCCTTGGCTC TAACAGCGGA TCTCGCCAGT TTTTGGCAAG GGCCCTATGT GGAAGTGAAA
AAAGAAATGC GTGGGCGTTA TCCTAAACAC CTGTGGCCGG ACGACCCTGC CAATACGCAG
CCCACAAAAT TTACCAAGAA GAAAACCTTA GGTTTATCTC AGTCATAG
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| Protein sequence | MNNLPIHSLL PSLRDAFAKH AQVILEAPTG AGKSTALPLA MLDWPEISGR ILMLEPRRVA
ARSVAQFIAS CRQQAVGQEV GYRVRGESKV SGETRLEIVT EGILTRMIQQ DPELTGIEMI
IFDEIHERHL TTDLGLALAL EVQSSLRDDL KILAMSATLS GLTLAELMPD AALLQSEGRS
FPVDIRYRPV AGQQHWLDHL SRVVLDAAIS VGDKGPQDIL VFLPGKAEIL RVAQYLEERL
DSSHVAVCPL YGELSAQEQD RAIKADSSRR KIVLSTNVAE SSLTIEGIGL VIDSGYKRQA
SFNPKTGVTR LSLKRISQAS ATQRAGRAGR LAAGECIRLW GQEEHQRLLK ADEPEISQAD
LVAMAHDCAY WGAKSFSDLL LLTAPPTVNE ALAWQLLQRL GMVDEHNKLT AHGKAAYELG
CHPRLAHMLL VAKSRDEHQL AALACLLAGI LEARGLPRKG ADIMNYLHFA TQGSAGQQAK
QWLKKLALDK QFTQADLVAI ASHAHHQDAG LLLALAYPDR IAKSRGVEGY QLANGTGVVL
SAEDALAQTP WLVVADYQET EGKNAGRIYL ASPLLPSLFD EELAELVERY DQCGWDEAKG
RAVAERQTKV GQILLKSEAI ANPNRGQIVA ALLSYIRQQG LQILNWHDNL AQFQARLQLA
RDLDPNADWP DMSDTALLAN LETWLAPYLE NVNNLPQLQK LDCFSLLVNQ LTWSQQQALD
ALLPTSWPLA TGTFAPILYD ASGRALLRVR LQETFGMADS PLLAQGKLKV TMELLSPAQR
PLALTADLAS FWQGPYVEVK KEMRGRYPKH LWPDDPANTQ PTKFTKKKTL GLSQS
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