Gene Shewana3_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0607 
Symbol 
ID4476817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp709775 
End bp712255 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content50% 
IMG OID639725143 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_868252 
Protein GI117919060 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00770988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGCG TAATGCGAAA TTTGGGTTTA AGTGCGTTAG CCGTTGCGGT ATTGACGAGT 
TGCGCCGCCA CCTCAACTGA AACGGCGACT CCCGCGACCA CACCACAGGC ATATCAAGTC
CCTTTAGCTC TGCCTCCCCA AGTTTCACAA TCCCTTACGC TGAACCAAAT TATGGCGAAC
CCCGATTGGA TGGGGATTTT CGCCAAGGAA GCCTACTGGA GCGATGACAG TCAGAGTGTT
TTCTTTGCCC GTCAACCCAG CGCGTCGCCG CTACGGAATT ACTATCAGCA GGGTATTAAT
GACAGCCGCG CCGTTGAACT GGCCATCGAT AAACTACACG CGGCGGACCA ACAATTTGGT
GTGTTAGACA GTGCTAAGGC CAACAAGGCC TATCTCTATC AAGGCAATAT TTTTGTTAAG
CATTTAAGCT CAGGCAAAAT CACCCAGCTT ACCCGCCAGC GCACGGCGAT CAGTGGCCTG
CGTTACCTCA ACAATGGCGA TATCGCCTAT TGGCAAGGGG ATAATGTTTT CCAAATCCAT
CAAGACAGTG GATTAGTGGA GCAGTTGGCT GAAATCAAAA TGGCGAAAGC GCCCGAGGGC
GTGAAAGAGC CGAGCAGCTA CTTAGCCAAG CAGCAGCACA GACTCATTCA ATATGTTGCT
CTGCAGCAAG AAAATGCCAA AGCCAAAGAA CAGTTTAAGA ACGAGCTGCA AAAGAGCGAT
CCGACCCTCG CCGCCAACAC TTGGTATCTC GGTGATGCCG AGGTGGTGTC TGAGCTGAGT
CTGTCGCCAG ACGGTCGCTA TCTGTTTGTG GCCTTAACCG ATAAAAACTA CACCGGCAGC
AGTGAACACG ACATCATGCC AAACTACCTC GGTAGCGAAG GCTATATCGA CCCTGTACCA
GTCCGCGCCC GTGTTGCAGA AGATACGCCT CCGGGACAAC GCTTTGTGGT GCTCGATCTC
AATGAGCATA AACAGATCGA TGTGACTATC GAAGGCTTAA CAGGCTTCGA TGAGGACGTT
TTAGCTAAGG TGAAGACTGA AAACGCCAAG GCAAAAGGTG AGTCGTATCA AAGCACTAAG
GCTCCCCGTA AAATCCAGCT GATGCAGGAT TGGGGCTGGA CTCAAAGTGC GATTCAATGG
CATGAGTCTG AGGACAAGCT GGCGGTGATG GTCGAAGCGA CCGATAACAA AGATCGCTGG
ATTGCCAGTG TCGATCTGGC AAAGGGCAAG TTTATCACCG AGCACCGCCT CCATGATGAT
GCTTGGGTGA ACTACGACTA TAACCAATTT GGTTGGTTAC CTGGAACAGA CGCCCTGTAT
TATCTCTCTG AAGAAACAGG CTATTCCCAG CTTTATATCA AGGCCCGTGG CGAAAAGCCC
CGCGCCTTGA CTCAAGGTAA GTTTGTGGTG AGCGATATTA CTCTATCGCC CGATGCAAAC
TACATCTACT ACAAGGCTAA CCAAAGCCAC CCTGGCATTT ACAATGTTCA TCGTGTGAAT
ATCGCTTCGG GCAAAAATGA GCAATTAACC CAGTGGGACG GTAACTTAGA TTACAGTTTA
AGCCCCGATG GCACTAAGCT GCTGCTGAAT GCGTCTCGCC GTACAGAGCC GAATGAGCTG
TATGTTCAGC CGATTGGCGG TGAGTTAAAA CAGCTCACGT CATACACCAG CGATGCCTTT
AAGCAATATC CATGGCAAGC GCCTGAAGTG GTTGCAGTTC CTTCAAACCA TGGCGCTGGC
CAAGTGTATG CGCGGGTTTA TTTGCCGCAG GGTTACGACA AATCCCGCGC CGAGAAATAC
CCCGCCGTTA TCTTCAACCA TGGTGCGGGC TACTTACAGA ATGCCGATTA TGGTTTCAGT
GGTTACTTCC GTGAGTTTAT GTTCCACAAC CTACTGACTC AACAAGGTTA TGTGGTGATG
GACATGGATT ACCGTGGTTC TAAAGGCTAT GGCCGCGACT GGCGCACGGC GATTTATCGC
AACATGGGTC ACCCTGAAGT TGAAGACTTA AAAGACGGTG TAACTTGGAT GGGCCAAAAT
GCCAACGTGG ATATTAAGCG AGTTGGTACT TATGGCGGTT CTTACGGTGG CTTCTTAACC
TTTATGTCCT TGTTTACTGA GCCGGAATTA TTCCAAGCTG GTGCGGCATT GCGCCCTGTG
GCGGATTGGG CACATTACAA CGCGCCATAC ACCTCCAACA TTTTAAACAC ACCGGATGTT
GACCCTATCG CCTACGAGCG TAGCTCGCCT ATCGAGCATG CCCAAGGTCT GACTAAGCCG
CTACTGATCA TGAGTGGCGT GATGGATGAC AACGTGTTCT TCCAAGATAG CGTGCGCATG
GTGCAGCATC TTATCGAGCT GGAAAAACCT ATGTTCGAAA CGGCTATTTA TCCGGTTGAG
CCCCATGGTT TCCGTCAGCC ATCGAGCTGG TTGGACGAAT ATCGCCGTAT TTATAAGCTG
TTTGAACAAG AGCTTAAGTA A
 
Protein sequence
MNSVMRNLGL SALAVAVLTS CAATSTETAT PATTPQAYQV PLALPPQVSQ SLTLNQIMAN 
PDWMGIFAKE AYWSDDSQSV FFARQPSASP LRNYYQQGIN DSRAVELAID KLHAADQQFG
VLDSAKANKA YLYQGNIFVK HLSSGKITQL TRQRTAISGL RYLNNGDIAY WQGDNVFQIH
QDSGLVEQLA EIKMAKAPEG VKEPSSYLAK QQHRLIQYVA LQQENAKAKE QFKNELQKSD
PTLAANTWYL GDAEVVSELS LSPDGRYLFV ALTDKNYTGS SEHDIMPNYL GSEGYIDPVP
VRARVAEDTP PGQRFVVLDL NEHKQIDVTI EGLTGFDEDV LAKVKTENAK AKGESYQSTK
APRKIQLMQD WGWTQSAIQW HESEDKLAVM VEATDNKDRW IASVDLAKGK FITEHRLHDD
AWVNYDYNQF GWLPGTDALY YLSEETGYSQ LYIKARGEKP RALTQGKFVV SDITLSPDAN
YIYYKANQSH PGIYNVHRVN IASGKNEQLT QWDGNLDYSL SPDGTKLLLN ASRRTEPNEL
YVQPIGGELK QLTSYTSDAF KQYPWQAPEV VAVPSNHGAG QVYARVYLPQ GYDKSRAEKY
PAVIFNHGAG YLQNADYGFS GYFREFMFHN LLTQQGYVVM DMDYRGSKGY GRDWRTAIYR
NMGHPEVEDL KDGVTWMGQN ANVDIKRVGT YGGSYGGFLT FMSLFTEPEL FQAGAALRPV
ADWAHYNAPY TSNILNTPDV DPIAYERSSP IEHAQGLTKP LLIMSGVMDD NVFFQDSVRM
VQHLIELEKP MFETAIYPVE PHGFRQPSSW LDEYRRIYKL FEQELK