Gene Shewana3_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0602 
Symbol 
ID4476637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp705513 
End bp706727 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content46% 
IMG OID639725138 
Productcytochrome b/b6 domain-containing protein 
Protein accessionYP_868247 
Protein GI117919055 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000576389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000717465 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTAAGA ATTTAATTAA TTGGATCGAT GCGCGTATCC CAATGACGGC GACTTATAAC 
CGTCACGTGG GTCAGTATGC GACGCCAACT AACTTTAACT TCTGGTACTT CTTCGGTTCA
TTAGCCATGT TGGTATTGGT TAACCAATTA CTGACGGGTA TTTGGTTGAC CATGAACTAT
GTACCAACAG CAGAAGGTGC GTTCGCCTCT GTTGAATACA TCATGCGTGA CGTAGAGTAC
GGCTGGTTAT TGCGTTATAT GCACTCAACG GGTGCGTCTG CATTCTTCGT GGTGATCTAC
TTACATATGT TCCGTGGTCT GATTTACGGT TCATATCAAA AACCTAGAGA ACTGCTGTGG
CTATTCGGTA TGTTGATTTT CCTCGTGCTG ATGGCTGAAG CCTTTATGGG TTACTTGCTA
CCATGGGGAC AAATGTCTTA CTGGGGCGCG CAGGTAATTA TTTCTCTGTT CGGTGCTATC
CCTGTTATCG GTGATGACTT AACCCTGTGG ATCCGTGGTG ACTACGTGAT CTCTGGCGCG
ACACTGAACC GTTTCTTCGC TCTGCACGTT ATCGCACTGC CATTAGTGTT AGTGGTTTTA
GTGTTCTTAC ACTTAATCGC GCTGCACGAA GTGGGTTCAA ACAACCCAGA CGGTATCGAA
ATCAAGAAGA ACAAAGACGA GAATGGCTGG CCAGTTGATG GTATTCCATT CCACCCATAC
TACACAGTTA AAGACATTAT GGGTGTTGCG GGCTTCCTGA TCGTGTTCTG TTACGTGCTG
TTCTTCATCC CAGAAGGCGG CGGTTACTTC CTTGAGAAGC CAAACTTTGA AGCGGCTAAC
CCAATGAAGA CCCCAGAGCA CATTGCACCT GTGTGGTACT TCACTCCGTT CTACGCCATC
TTACGTGCTG TTCCCGATAA ATTGGGCGGT GTGGTAATGA TGGGTCTGTC GATTGCAGTA
CTGTTCGTAT TGCCTTGGTT AGACCGTTGT AAAGTGAAGT CAATTCGCTA CCGCAGCACG
CTGCACAAAT TGAACATCGC TCAGTTCGCT GTATCGTTCA TCGTCTTAGG TTACTTAGGC
GCTGTACCTG CAACACCAGA GCTGACTATT GTTGCACGTA TCTTCACTGT GACGTATTTC
GGCTACTTCT TATTACTGTG GTTATACAGC AAAAATGAGA AAACTAAGCC TGTTCCAGCG
AGGTTGACAC ACTAA
 
Protein sequence
MVKNLINWID ARIPMTATYN RHVGQYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY 
VPTAEGAFAS VEYIMRDVEY GWLLRYMHST GASAFFVVIY LHMFRGLIYG SYQKPRELLW
LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDYVISGA
TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PVDGIPFHPY
YTVKDIMGVA GFLIVFCYVL FFIPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI
LRAVPDKLGG VVMMGLSIAV LFVLPWLDRC KVKSIRYRST LHKLNIAQFA VSFIVLGYLG
AVPATPELTI VARIFTVTYF GYFLLLWLYS KNEKTKPVPA RLTH