| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0588 |
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| Symbol | psd |
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| ID | 4476619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 689898 |
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| End bp | 690776 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725120 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_868233 |
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| Protein GI | 117919041 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0111413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAAG TTAAAATTGC GCTGCAGTAC ATGCTGCCAA AGCACCTGTT ATCTCGCTTA
GTCGGTAAAC TTGCCGCTTC CGAAGCTGGC GCATTAACGA CTGCCGCGAT TAAATGGTTT
ATCAAACAAT ATAAAATCGA TATGAGCGAA GCGGCTCAGA GCGAACCCGA AGCCTATAAA
AGCTTCAACG ACTTTTTTAC CCGCGCACTT AAGCCCGGTA TTCGCCCAAT TAATACTGCG
ACCAACATCA TGGTGCACCC GGTTGATGGT GCCGTTAGCC AACTCGGCCC CATCAAGGAT
GGTCGTATTT TCCAAGCTAA AGGCCATCAC TATTCTTCAC TCACCCTACT GGGCGACCAA
GCCGAAGATG CTAAACGCTT CGAAGGTGGG GATTTTGCGA CCATTTATCT CGCTCCCAAG
GATTATCACC GCATCCATAT GCCGATAAAG GGCACACTGT CAAAGATGAC CTATGTACCG
GGCGAACTGT TTTCCGTTAA CCCCTTAACG GCTCGCCATG TACCAGGCCT GTTTGCTCGC
AACGAACGTG TCGTGGCGAT TTTTGAAACC GAACTTGGCC CGCTAGCCAT GGTATTAGTG
GGTGCGACCA TTGTGGCTAG CATCGAAACC GTTTGGGCAG GCACTATTAC GCCGCCAACG
GGCAAGCAAG TCTTCACGTG GGAATACCCA ACGGTAGGAC CAGACGCCAT TACTTTAGAT
AAAGGCGAAG AAATGGGCCG CTTCAAGCTT GGCAGTACCG TCGTCATGCT GTTTGCTAAA
GATGCTATCG ACACCTTCGC CGAAGGCGTT GAACCCGAAG CCGTAACGCG TATGGGTCAA
GCCTTTGCAA ATCTGAAAAA TCAGGCGTCA GCCGACTAA
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| Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAASEAG ALTTAAIKWF IKQYKIDMSE AAQSEPEAYK
SFNDFFTRAL KPGIRPINTA TNIMVHPVDG AVSQLGPIKD GRIFQAKGHH YSSLTLLGDQ
AEDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARHVPGLFAR
NERVVAIFET ELGPLAMVLV GATIVASIET VWAGTITPPT GKQVFTWEYP TVGPDAITLD
KGEEMGRFKL GSTVVMLFAK DAIDTFAEGV EPEAVTRMGQ AFANLKNQAS AD
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