Gene Shewana3_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0567 
Symbol 
ID4476528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp660098 
End bp660865 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content52% 
IMG OID639725099 
ProductABC-3 protein 
Protein accessionYP_868212 
Protein GI117919020 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATC TGGAACTGAT GTCGATCCTG CTGCCAGCAC TGGCGGCGGG GATCTTAGTG 
CTTTCAACGC ATATTGTACT TGGCAAACAA GTGCTTAAGC GTGGGATCAT CTTTATCGAT
TTAGCCATTG CTCAAGTCGC CGCGTTGGGG GCGATTGTGG CGCACATGGA CCATAGGTTA
GAAGAGATGC CATTTTCTAA TGTGTGGATG CCGGCCTTAT TCGCCCTTGC GGGGGCGGGT
TTTATCGCTT GGTTATCTAA GCGGATGGCG GGTGAGCTAG AGGCGATGAT AGGTTGCTTT
TACGTGTTGT CGGCGGTGGC GGCCATGCTA TTGCTGGCGA ACGATCCCCA CGGGGCTGAG
CTGTTAAAGC AATTGATGTC GGGCCAGATC CTTTGGGTGA GTTGGTCGCA ATTAGTGTTG
CCGACCGTGG TTTATGCGGC TGTGTTAGCA GTGATTTTTC TGCGGCCACA GATCTTAAAT
GGTGCGGGAT TCTATCTGCT ATTTGCACTG GTAATCACCT TGTCGGTAGA GCTGGTTGGG
GTCTATCTAG TGTTTAGCAC ACTCATTTTG CCAGCACTTG CGCTCAACAA GTACCAAGGT
AAGAACGGCC TATTTTACGC TTATCTGGTC GGCCTTATGG GTTACTTGCT GGGGCTGGTG
CTTTCGGCAA CGTTGGACTT ACCGAGCGGC GCGGCGATTG TCGCGACTTT GGCCCTTAGT
GCCTTGGTCT TCCGTTTAGG CCTAAGTAAA ACCGCGGCAG TGCGCTAG
 
Protein sequence
MLDLELMSIL LPALAAGILV LSTHIVLGKQ VLKRGIIFID LAIAQVAALG AIVAHMDHRL 
EEMPFSNVWM PALFALAGAG FIAWLSKRMA GELEAMIGCF YVLSAVAAML LLANDPHGAE
LLKQLMSGQI LWVSWSQLVL PTVVYAAVLA VIFLRPQILN GAGFYLLFAL VITLSVELVG
VYLVFSTLIL PALALNKYQG KNGLFYAYLV GLMGYLLGLV LSATLDLPSG AAIVATLALS
ALVFRLGLSK TAAVR