Gene Shewana3_0566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0566 
Symbol 
ID4476527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp659185 
End bp660093 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content53% 
IMG OID639725098 
Productperiplasmic solute binding protein 
Protein accessionYP_868211 
Protein GI117919019 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATCA ATTCTAATTT TGTTAAAGCG GCCGCAGCGG CCCTGTCTTT CGCCTGTTCA 
GGTTTTGCCC ATGCAGAGCT GAATGTGTTT GCCTGTGAAC CCGAATATGC CGCATTGGCA
AAAGAGTTGG CTCCAAACGC CAGCATTTAT TCGGCAACCA CGGCCTTACA GGATCCGCAT
CAAGTGCAGG CGCGTCCGAG TTTAATCGCC AAAATGCGCC AAGCGGATCT GGTGGTCTGT
GCGGGCGCCG ATTTAGAAAT CGGTTGGCTG CCAATGCTGC AAATGAAGTC GGCTAACGCT
AAGGTTCGCT CTACCGATCA GGGGCTGTTT TTCGCCGCCG ATCAAATCGA TACCTTAGAT
AAGTTAGCGA GTGTGGACCG TAGCATGGGG GATGTGCATG CTCAGGGAAA TCCGCATATC
CACTTCGATC CGACGCGTTT GCTAAGCGTC GCGAATGCGC TCAGCGCTAA GATGAGCCAA
CTCGACCCGA GCGAGGCGGC GAATTACCAA AAGGCATTAG CGGACTTTAG TACTCGTTGG
CAGGCGGCGG TCCCCCGCTG GGAAGAGCAG GCTAAAGCGT TAAAAGGCAA AAAGGTCATC
GCCTATCACA CCAGTTTTAG ATATCTGTTC AACTGGTTGG GGATTGAACA AGCTGCTGAT
CTTGAGCCTA AACCCGGTCT GGCACCGACT AGCGGCCATT TAGCCAGTTT GCTGAGCCGC
GCCGAGCAGG GCGATATTCT GGCGGTAGTT GTGGCGTCCT ATCAGGATGA GCGTGGTGCT
AAGTGGTTGG GTGAAAAGGC TAATCTACCT GTGCTTATGT TGCCAATGTC GGTTGGTGGC
AACGATGCGA GTCAAGATCT CTTCAGCCTC TACGACAGCG CGATTGCCCT CTTAAACGGG
GTGAAATAA
 
Protein sequence
MRINSNFVKA AAAALSFACS GFAHAELNVF ACEPEYAALA KELAPNASIY SATTALQDPH 
QVQARPSLIA KMRQADLVVC AGADLEIGWL PMLQMKSANA KVRSTDQGLF FAADQIDTLD
KLASVDRSMG DVHAQGNPHI HFDPTRLLSV ANALSAKMSQ LDPSEAANYQ KALADFSTRW
QAAVPRWEEQ AKALKGKKVI AYHTSFRYLF NWLGIEQAAD LEPKPGLAPT SGHLASLLSR
AEQGDILAVV VASYQDERGA KWLGEKANLP VLMLPMSVGG NDASQDLFSL YDSAIALLNG
VK