Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0566 |
Symbol | |
ID | 4476527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 659185 |
End bp | 660093 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725098 |
Product | periplasmic solute binding protein |
Protein accession | YP_868211 |
Protein GI | 117919019 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCATCA ATTCTAATTT TGTTAAAGCG GCCGCAGCGG CCCTGTCTTT CGCCTGTTCA GGTTTTGCCC ATGCAGAGCT GAATGTGTTT GCCTGTGAAC CCGAATATGC CGCATTGGCA AAAGAGTTGG CTCCAAACGC CAGCATTTAT TCGGCAACCA CGGCCTTACA GGATCCGCAT CAAGTGCAGG CGCGTCCGAG TTTAATCGCC AAAATGCGCC AAGCGGATCT GGTGGTCTGT GCGGGCGCCG ATTTAGAAAT CGGTTGGCTG CCAATGCTGC AAATGAAGTC GGCTAACGCT AAGGTTCGCT CTACCGATCA GGGGCTGTTT TTCGCCGCCG ATCAAATCGA TACCTTAGAT AAGTTAGCGA GTGTGGACCG TAGCATGGGG GATGTGCATG CTCAGGGAAA TCCGCATATC CACTTCGATC CGACGCGTTT GCTAAGCGTC GCGAATGCGC TCAGCGCTAA GATGAGCCAA CTCGACCCGA GCGAGGCGGC GAATTACCAA AAGGCATTAG CGGACTTTAG TACTCGTTGG CAGGCGGCGG TCCCCCGCTG GGAAGAGCAG GCTAAAGCGT TAAAAGGCAA AAAGGTCATC GCCTATCACA CCAGTTTTAG ATATCTGTTC AACTGGTTGG GGATTGAACA AGCTGCTGAT CTTGAGCCTA AACCCGGTCT GGCACCGACT AGCGGCCATT TAGCCAGTTT GCTGAGCCGC GCCGAGCAGG GCGATATTCT GGCGGTAGTT GTGGCGTCCT ATCAGGATGA GCGTGGTGCT AAGTGGTTGG GTGAAAAGGC TAATCTACCT GTGCTTATGT TGCCAATGTC GGTTGGTGGC AACGATGCGA GTCAAGATCT CTTCAGCCTC TACGACAGCG CGATTGCCCT CTTAAACGGG GTGAAATAA
|
Protein sequence | MRINSNFVKA AAAALSFACS GFAHAELNVF ACEPEYAALA KELAPNASIY SATTALQDPH QVQARPSLIA KMRQADLVVC AGADLEIGWL PMLQMKSANA KVRSTDQGLF FAADQIDTLD KLASVDRSMG DVHAQGNPHI HFDPTRLLSV ANALSAKMSQ LDPSEAANYQ KALADFSTRW QAAVPRWEEQ AKALKGKKVI AYHTSFRYLF NWLGIEQAAD LEPKPGLAPT SGHLASLLSR AEQGDILAVV VASYQDERGA KWLGEKANLP VLMLPMSVGG NDASQDLFSL YDSAIALLNG VK
|
| |