| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0561 |
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| Symbol | |
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| ID | 4476522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 654980 |
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| End bp | 656635 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725093 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_868206 |
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| Protein GI | 117919014 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCT CACTCATATT CATGTTCGCT CTCAGCTTTC CCCTGCTATT GAGTACCGAG
GTTTTCGCGA CGGATGCAGC CGAACCCGTT GCCGCCACTC AAACCGCTAC CGTCCCTAAC
GAAGCCCAAA ACGAATTAAT TACGCTAAAG TCAGCGATTA AAGAGGATAT TGCGCGCTTA
TCCCAATCCC AAGGTGAGTT GCGCACCATT GTTGAATATC GCATTCAAAA CAAGACATTG
CAGTTACGCA ATAAGATTAA AGTGCTGTTA GAAGATGAGA ACTACGATAA AGCCTTTATG
TTGGCATTGG TGCAAGAGCA GCTGACATTT AATCTTAAAA TCAACGACTA CTTCAATGAT
ATTGTGACCA AGTTGTCCCA TAAACTCGGC TCGGCGGATG ATGAGTCGAC CTTACTCGAA
ATCTCTAAAC GTGAGCTCGA TAAGGACAAC AACTACAAAC AACGACTCGA GACCTTAAAC
TGGCTCGGCC AAATGGGCGA AGATGTCGCA GCGCAGAAAG CGGAGCTGAC CCAAATTCTC
TTAAGTCGCG CCGATAACTT CGATAGCTTT GTCACTTTTA CCCAGCAGCA GTTACAAAAT
GCAGTTAACG CCGCCACTAA TGCCGGTAAA GATGTGACCG CCGCGCAAAC CAGTCGCGTC
ATGCAGCTAA AGGACAGATT GGCGCTCAAT AGCCAGAGCC TTAGCATAGA TATCGACTTA
CTCGATGCGC TCGAGCAAAA CACCGCCTCA CTGAAAAAGA CCCTGTTCAG TATCTCAGGC
GATATCACCC AGGATGTCTT GAGTATCGAT GTGGCCTCAA GCTTAGTCGA ACAATGGCTG
CATACGGCCA AAGAACAGTC CATCAACCAT GGCCCGACTT TAGTCTTTAA GCTATTTATC
TTCTGTATGA TCCTGTTTGT CGCAAGCCTT GCGGGCAAAC TGGCGAAGAA GATTGTGAGT
AATACCGTTA GTAACTCTAA GTTAAATTTT AGTAAGTTAC TGCAAGACTT CTTTACCTCG
CTCTCGGGAA AAGCGGTCTT CACTATCGGT GTACTGATAG CCCTGTCCCA GCTTGGCATA
GAGTTAGGCC CGTTATTGGC AGGCTTTGGT ATCGCCGGTG TGATCATAGG TTTCGCCCTG
CAGGATTCAC TCTCGAACTT TGCCTCGGGC ATGATGATTT TGATCTATCG TCCCTACGAT
GTGGGTGACT TGATTAGCGC GGCTGGTGTA ACTGGTCGAG TTAGCCATAT GAGCCTAGTC
TCCACCACAA TTAAAACCTT AGATAACCAA AGGCTTATTA TTCCAAACAA CAAGATTTGG
GGTGATACCA TTAACAATAT TACCGCCGAG CACCAACGCC GCGTCGACAT GACCTTCGGC
ATTGGCTATG GCGACAATAT TGAGCACGCC GAAGCCGTGC TTAAGTCGAT TGTGGAAGCG
CATCCTAAGG TGCAAAAAAT CCCTGCACCG CTCATTAAGC TGCACGTTTT AGGGGAGTCC
TCGGTCGACT TTATCGTCCG TCCTTGGGCT AAACCCGAAG ATTATTGGGA TGTGTATTGG
GATATTACCC GCGAAGTGAA AATGCGCTTC GATGCCGAGG GCATCAGCAT TCCTTTCCCG
CAGCGCGATG TACATATTTA CCAAACCAGT AAATAA
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| Protein sequence | MRRSLIFMFA LSFPLLLSTE VFATDAAEPV AATQTATVPN EAQNELITLK SAIKEDIARL
SQSQGELRTI VEYRIQNKTL QLRNKIKVLL EDENYDKAFM LALVQEQLTF NLKINDYFND
IVTKLSHKLG SADDESTLLE ISKRELDKDN NYKQRLETLN WLGQMGEDVA AQKAELTQIL
LSRADNFDSF VTFTQQQLQN AVNAATNAGK DVTAAQTSRV MQLKDRLALN SQSLSIDIDL
LDALEQNTAS LKKTLFSISG DITQDVLSID VASSLVEQWL HTAKEQSINH GPTLVFKLFI
FCMILFVASL AGKLAKKIVS NTVSNSKLNF SKLLQDFFTS LSGKAVFTIG VLIALSQLGI
ELGPLLAGFG IAGVIIGFAL QDSLSNFASG MMILIYRPYD VGDLISAAGV TGRVSHMSLV
STTIKTLDNQ RLIIPNNKIW GDTINNITAE HQRRVDMTFG IGYGDNIEHA EAVLKSIVEA
HPKVQKIPAP LIKLHVLGES SVDFIVRPWA KPEDYWDVYW DITREVKMRF DAEGISIPFP
QRDVHIYQTS K
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