Gene Shewana3_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0546 
Symbol 
ID4476507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp641818 
End bp642510 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content50% 
IMG OID639725079 
Producthypothetical protein 
Protein accessionYP_868192 
Protein GI117919000 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT CACTGTACAG CGTTTTGGCA TTATCGACGG GATTGTTACT AACCACCAAC 
GCCTTTGCGG CGGTGTCCGG CAATATTGGC GGCACGTCTA ACTATCTATG GCGCGGGGTC
ACTCAAACCA ATGACTCGGT CGCAATCCAA GGAGGCATAG ACTATAGCCA TGACTCTGGA
TTCTATGCCG GCACTTGGGC ATCGAATGTC GACTTTGGCG ACGATACCAG CTATGAGTTG
GATCTCTACG CAGGCTACGG CGGCAACATC ACCGAAGACC TCAGCTACGA TATTGGCTAC
CTTTACTATG CCTATCCCGA TGCCGAAGGC AGCATCGATT TTGGTGAACT GCATGGCGCT
ATCACCTGGA AATGGTTTGA ACTCAGTTAC TCACAGGTGA TCAATGCGGG TGATGATGTC
GCAGCCGAGC CATTAGATAA CAAGGACATG AGTTACCTTG CGGCCACGGC ATCTTTCCCG
CTGACGGATA AACTCAGCCT GTCTTTGCAC TACGGCTACT CCAGTGGCGA TGTGGTTGAA
TCTTGGTTTG GCGAAGATAA CTACGCAGAT TACAACGTTA CTCTGAGTGC CGATACCAGC
ATGGGAACCG TGTCATTTAT GGTGTCGGAT ACAGATCTGC AGGGTGATGA TGCCAAGGTA
GTTTTAGGCT ATTCCTACGG CTTTGATTTA TAA
 
Protein sequence
MRKSLYSVLA LSTGLLLTTN AFAAVSGNIG GTSNYLWRGV TQTNDSVAIQ GGIDYSHDSG 
FYAGTWASNV DFGDDTSYEL DLYAGYGGNI TEDLSYDIGY LYYAYPDAEG SIDFGELHGA
ITWKWFELSY SQVINAGDDV AAEPLDNKDM SYLAATASFP LTDKLSLSLH YGYSSGDVVE
SWFGEDNYAD YNVTLSADTS MGTVSFMVSD TDLQGDDAKV VLGYSYGFDL