Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0523 |
Symbol | |
ID | 4479714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 613958 |
End bp | 615565 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639725056 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_868169 |
Protein GI | 117918977 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA TTGCTGCGGC ACCTGAGGCT ATAGTCGCGG GGGCTATACC GAGCGAATAT GAGCGCGGTA GTCGCCGTTC GTGGATTGCC GTTTTCGGTG GTTTGATTGG CGCCTTTATG GCGATCCTCG ATATTCAAAT CACCAATGCC TCGATGAAGG AAATCCAAGG CAGCCTCGGC GCAACACTGG AGGAAGGCAG TTGGATTTCA ACGGCTTATC TGGTTGCCGA GATGATTGCG ATTCCGCTCT CGGGCTGGTT AAGCACAGGG CTTTCGGTCA GACGTTATCT GCTGTGGACC ACTGCTGCCT TTATCTTTGC CTCTATCCTG TGTTCGATTT CGTGGAACCT TGAGGCTATG ATAGCCTTTC GGGCGTTGCA GGGCTTCTTT GGTGGCGCGC TGATCCCGCT GGCGTTTCGG TTGATCTTAG AATTTTTACC CGAGAATAAA CGTGCAGTGG GGATGGCGTT ATTCGGGGTG ACGGCGACGT TTGCGCCCTC GATTGGCCCA ACCTTAGGTG GTTGGTTAAC TGAGCATTTT AGTTGGCATT ACCTGTTTTA TATCAACGTG CCGCCCGGAT TGCTGGTGAT GGCGATGCTG GCCTATGGCC TCGAAAAGCG CCCTGTGGTG TGGGACAAAC TGAAAAATGC CGACTTAGCG GGCATTGTCA CTATGGCGCT GGGCATGGGC TGTCTCGAAG TTGTGCTTGA GGAAGGCAAC CGCAAGGATT GGTTTGGCTC GGATTTGATC CGCAATCTCG CCATTATTGC CGCAGTGAAT TTAGTGCTGT TTGTGTGGAT CCAGCTTAAG CGCAAAGACC CTTTAGTGAA TTTACGCCTG CTCGGTAAAC GCGATTTTGT GCTTTCGACC ATAGCTTACT TTTTACTGGG AATGGCACTC TTTGGCGCTA TCTATTTGAT CCCACTTTAT TTATCCCAAG TGCATGATTA CACTCCGCTG GAAATCGGTG AAGTCATTAT GTGGATGGGC TTCCCGCAGC TGTTGGTATT GCCATTAGTG CCACGTTTAA TGCAACGTTT CGACGGGCGT TATTTAGCCG CCTTCGGCTT TTTTATGTTT GCCCTCAGTT ATTACATGAA TAGCCAAATG ACCGCCGATT ACGCCGGGCC GCAGATGATC GCCTCCCAAG TGGTGCGCGC CTTAGGCCAG CCCTTTATCT TAGTGCCCAT TGGTATGTTA GCAACGGCCC ATTTAAAGCC CCATGAGAAT CCTTCGGCTT CGACCGTGCT GAACGTGATG CGTAACTTAG GCGGCGCCTT TGGTATCGCG CTGGTGGCGA CCTTAACCGA TAACTTGGCC CGTAGTCATT TGGCCCATGT GAAGGAGTCT CTGCCTGCGG TCAGCACACA GGCGCAGGAT TATTTGAATC AGAGCGCCAG TATGTTGCAA CAGGGCGGCT CGGATCCCTA TACCGCCTCC ATGCAGGCCA AGGTGCTATT AGGGCAAACC ATGAGTCAGC AGGCCTATAT TCAAGCCTAT AACGATGTGT TTTTGATTAT GGGTGCCATG TTATTAATTG CCGTGGTGGC TGTGCTGCTT ATCCGTAAAC CTCAAGGGCC AGTCGCCCAC GATGCGGTGA TCGAATAA
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Protein sequence | MSTIAAAPEA IVAGAIPSEY ERGSRRSWIA VFGGLIGAFM AILDIQITNA SMKEIQGSLG ATLEEGSWIS TAYLVAEMIA IPLSGWLSTG LSVRRYLLWT TAAFIFASIL CSISWNLEAM IAFRALQGFF GGALIPLAFR LILEFLPENK RAVGMALFGV TATFAPSIGP TLGGWLTEHF SWHYLFYINV PPGLLVMAML AYGLEKRPVV WDKLKNADLA GIVTMALGMG CLEVVLEEGN RKDWFGSDLI RNLAIIAAVN LVLFVWIQLK RKDPLVNLRL LGKRDFVLST IAYFLLGMAL FGAIYLIPLY LSQVHDYTPL EIGEVIMWMG FPQLLVLPLV PRLMQRFDGR YLAAFGFFMF ALSYYMNSQM TADYAGPQMI ASQVVRALGQ PFILVPIGML ATAHLKPHEN PSASTVLNVM RNLGGAFGIA LVATLTDNLA RSHLAHVKES LPAVSTQAQD YLNQSASMLQ QGGSDPYTAS MQAKVLLGQT MSQQAYIQAY NDVFLIMGAM LLIAVVAVLL IRKPQGPVAH DAVIE
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