Gene Shewana3_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0506 
Symbol 
ID4479697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp597225 
End bp598706 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content52% 
IMG OID639725039 
Product3-octaprenyl-4hydroxybenzoate decarboxylase 
Protein accessionYP_868152 
Protein GI117918960 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTA AGGATTTACG CAGCTTTATC GATCATCTGG AAGCCAATGG CGAACTCAAA 
CGCATTAGCT ACCCCGTTGA TCCTCATTTA GAAATGACAG AGATCGCCGA TCGCGTTCTA
CGCGCCAAAG GCCCTGCACT CCTATTCGAA AATCCAACCA ATCATTCAAT GCCTGTGCTG
GCCAACCTCT TTGGAACTCC CAAACGTGTC GCCATGGCGC TGGGTAAAGA GGATCCACTC
GCGCTGCGCG ATGTGGGTGA GCTGCTGGCG TTTTTAAAAG AACCCGAGCC ACCACGCGGC
TTTAAAGACG CGATTTCAAA AATCCCCATG TTCAAGCAAG CCTTGAATAT GCCGCCTAAG
ACGGTGCGTA ATCCCGCCTG TCAGCAAGTA GTTAAAACCG GTGATGAGGT CGATTTAACT
CAGCTGCCGA TCCAGCATTG CTGGCCGGGC GATGTCGCGC CGCTGGTCAC TTGGGGTTTA
ACTATCACCA AAGGGCCGCG TAAGAGTCGC CAAAACCTTG GGATCTACCG TCAGCAGTTG
CTCGGCAAGA ATAAACTCAT TATGCGCTGG CTGTCTCACC GTGGTGGCGC GCTTGATTTT
GCTGATTTTA AAGAGCAATT CCCCGGCGAG CGTTACCCTG TGGTGGTTGC CTTAGGCTCT
GATCCTGTGA CCATCTTAGG CGCAGTCACC CCAGTGCCCG ATGCCATGAG CGAATACGCC
TTCGCAGGAT TGCTGCGCGG CGAGCGCACC GAAGTCTGCA AGGCCTTAAG CTGTGATTTA
GAAGTACCCG CCAGCAGCGA GATCATCCTC GAAGGCTATA TCGATCCCGA CGAAATGGCC
GAAGAAGGCC CCTACGGCGA CCACACGGGT TACTACAACG AGACGGATAA ATTCCCCGTC
TTTACCGTGA CCCACATTAC CCACCGTAAG GATCCGATTT ACCACAGCAC CTACACTGGC
CGTCCACCGG ATGAACCCGC CATGTTAGGT GTGGCACTCA ACGAAGTGTT TGTGCCGATT
TTGCGTAAGC AATATCCTGA AATTATTGAT TTTTACCTGC CTCCCGAAGG TTGCTCCTAT
CGGATGGCGG TGATCTCGAT TCGTAAACAA TATCCCGGCC ATGCTAAACG GGTAATGATG
GGTGCTTGGT CCTTCCTGCG CCAATTTATG TATACCAAGT TTATTGTGGT GGTCGACGAC
GATGTGAATT GCCGCGACTG GAACGATGTG ATTTGGGCCA TTACCACCCG TATGGATCCT
AAGCGCGATA CAGTGATGAT CGATAACACG CCTATCGATT ACCTCGACTT TGCCTCTCCA
GTGGCGGGCC TAGGCTCCAA AATGGGTCTC GATGCCACTA ATAAGTGGGA AGGTGAAACC
AACCGCGAAT GGGGCACGCC GATTGTGATG GATCCTAAGG TTAAGCAAAA GATCGACTCA
ATCTGGGATG AATTAGGCAT AGACGACAGC CCAACCCTAT AA
 
Protein sequence
MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE NPTNHSMPVL 
ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK
TVRNPACQQV VKTGDEVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL
LGKNKLIMRW LSHRGGALDF ADFKEQFPGE RYPVVVALGS DPVTILGAVT PVPDAMSEYA
FAGLLRGERT EVCKALSCDL EVPASSEIIL EGYIDPDEMA EEGPYGDHTG YYNETDKFPV
FTVTHITHRK DPIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDD DVNCRDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VAGLGSKMGL DATNKWEGET NREWGTPIVM DPKVKQKIDS
IWDELGIDDS PTL