Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0506 |
Symbol | |
ID | 4479697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 597225 |
End bp | 598706 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639725039 |
Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
Protein accession | YP_868152 |
Protein GI | 117918960 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATC GATCATCTGG AAGCCAATGG CGAACTCAAA CGCATTAGCT ACCCCGTTGA TCCTCATTTA GAAATGACAG AGATCGCCGA TCGCGTTCTA CGCGCCAAAG GCCCTGCACT CCTATTCGAA AATCCAACCA ATCATTCAAT GCCTGTGCTG GCCAACCTCT TTGGAACTCC CAAACGTGTC GCCATGGCGC TGGGTAAAGA GGATCCACTC GCGCTGCGCG ATGTGGGTGA GCTGCTGGCG TTTTTAAAAG AACCCGAGCC ACCACGCGGC TTTAAAGACG CGATTTCAAA AATCCCCATG TTCAAGCAAG CCTTGAATAT GCCGCCTAAG ACGGTGCGTA ATCCCGCCTG TCAGCAAGTA GTTAAAACCG GTGATGAGGT CGATTTAACT CAGCTGCCGA TCCAGCATTG CTGGCCGGGC GATGTCGCGC CGCTGGTCAC TTGGGGTTTA ACTATCACCA AAGGGCCGCG TAAGAGTCGC CAAAACCTTG GGATCTACCG TCAGCAGTTG CTCGGCAAGA ATAAACTCAT TATGCGCTGG CTGTCTCACC GTGGTGGCGC GCTTGATTTT GCTGATTTTA AAGAGCAATT CCCCGGCGAG CGTTACCCTG TGGTGGTTGC CTTAGGCTCT GATCCTGTGA CCATCTTAGG CGCAGTCACC CCAGTGCCCG ATGCCATGAG CGAATACGCC TTCGCAGGAT TGCTGCGCGG CGAGCGCACC GAAGTCTGCA AGGCCTTAAG CTGTGATTTA GAAGTACCCG CCAGCAGCGA GATCATCCTC GAAGGCTATA TCGATCCCGA CGAAATGGCC GAAGAAGGCC CCTACGGCGA CCACACGGGT TACTACAACG AGACGGATAA ATTCCCCGTC TTTACCGTGA CCCACATTAC CCACCGTAAG GATCCGATTT ACCACAGCAC CTACACTGGC CGTCCACCGG ATGAACCCGC CATGTTAGGT GTGGCACTCA ACGAAGTGTT TGTGCCGATT TTGCGTAAGC AATATCCTGA AATTATTGAT TTTTACCTGC CTCCCGAAGG TTGCTCCTAT CGGATGGCGG TGATCTCGAT TCGTAAACAA TATCCCGGCC ATGCTAAACG GGTAATGATG GGTGCTTGGT CCTTCCTGCG CCAATTTATG TATACCAAGT TTATTGTGGT GGTCGACGAC GATGTGAATT GCCGCGACTG GAACGATGTG ATTTGGGCCA TTACCACCCG TATGGATCCT AAGCGCGATA CAGTGATGAT CGATAACACG CCTATCGATT ACCTCGACTT TGCCTCTCCA GTGGCGGGCC TAGGCTCCAA AATGGGTCTC GATGCCACTA ATAAGTGGGA AGGTGAAACC AACCGCGAAT GGGGCACGCC GATTGTGATG GATCCTAAGG TTAAGCAAAA GATCGACTCA ATCTGGGATG AATTAGGCAT AGACGACAGC CCAACCCTAT AA
|
Protein sequence | MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE NPTNHSMPVL ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK TVRNPACQQV VKTGDEVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL LGKNKLIMRW LSHRGGALDF ADFKEQFPGE RYPVVVALGS DPVTILGAVT PVPDAMSEYA FAGLLRGERT EVCKALSCDL EVPASSEIIL EGYIDPDEMA EEGPYGDHTG YYNETDKFPV FTVTHITHRK DPIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDD DVNCRDWNDV IWAITTRMDP KRDTVMIDNT PIDYLDFASP VAGLGSKMGL DATNKWEGET NREWGTPIVM DPKVKQKIDS IWDELGIDDS PTL
|
| |