Gene Shewana3_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0482 
Symbol 
ID4476711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp564442 
End bp566502 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content49% 
IMG OID639725016 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_868129 
Protein GI117918937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT TTCCATTTAC GAGTCAGTTA TGCAGTGCTG CCATTGCCGC CGCACTGCTG 
CTGACGGGTT GCACTACGGC GGATGTTCGC AACGAACAGC CTCAAGTTGC CGCGACGCAG
CAAACCGAGG CGCCGCTCAT TCCCATCGAA AACTTCTTTA ACGAGCAAAG TATTCGCCAT
CTAAAAATGT CCGACGATGG CAAATGGCTC GCCTTTGTAA AGGAATACCA AGGGGCCAGC
AATATCTATC TGATGGCGGA TAAGAGTGAC CTCGCTAGCG CCACGCCATT GACCACATCG
GTAGAACCTA TCCGCGCCTT CGAATGGTCC GCCAAGGGCA ATGACTTATT CTTTATGAAG
GACAAAGGCG GTAATGAGAA CACCCAGATT TACAAGCTGA GCTTTGAAGA ACACGCGGGT
AAAATCACCG CCAAAGAGCA GCGCTTAACC CATAAGGACG ACGTGCAATA CAGCGTGCTC
GAGCAGGTAA AAGACAATCC TGATTTACTG GTTGTTCAAG CCAACCACGA CGATTCGAGC
CGCATGGATA TTTATCTGCT CAATATCAAC GATGGCAAGT TAACCCCAAT CCTGAAGAAC
GAGCTGAGCT TTACTCAGGT GAAGTTTAAT AAACAGGGGC AACCTGTAAT TGCCAGCAGC
AGTAATCTCG ATAACACCAA TGCCTTATAT GTACAGATCG ACGGCAACTG GCGCAAGATC
ATTCAAAGTG CCAAGGGCGA GAGCATCGAT ATTCTAAAAG TGAACGATGA TAAGAAGCTC
GCCTATATCA GCGCCAATAT CGGCGATCGC GATAAACAGG AATTGCTGAA AGTCGATCTG
ATGACGGGTA AATATGAAAC CATTCACAGG GATCCCGACA ACGAGGCCGA CGTATTTGCG
GTACAGTTTA GCGATGCGGG TGAGCCCTTG GCAGTTGGTT ACTACGGTGG ACGTTTACGG
GTTTATCCCT TAGATGCCGA GTTTACCCGC CATTGGGATG TGATTAATCG TCATTTTAAT
CAAGATGTTG AAATCACAAT TGGCGAGATG AACGAGAAAA CCAATCTGTG GCAAATTCAT
GTCGCCAGCG ACAGAGCCGC AGGCGCTGAC TATCAATACA ATGCCGCCAC TGGGGATATC
CATCTATTAG TGGACATTCC AGCCAGCATT CCTGCGGATC AACTCTCGCC ACGCCAATCT
ATCGTGTATA CCGCGCGGGA TGGGGTGAAA ATCCAAGCCT ATTTAACGCT ACCGAAAGGT
AAACAGACTC AGCTACCGAC CATTATCCTG CCCCATGGCG GCCCTTGGGC ACGGGATTTT
TGGACACTCG ACTCGGGTTA TTTCCACGCG ATTGCCCAGT TCTATGCCAA CCGTGGTTAT
GCCGTGTTGC AACCTAACTT CCGCGCCTCG ACGGGTTTTG GTAAGAAATT CTTAAACCTA
GGTAACAATA ACTGGGGGAT TGGCAGCATG CAGCACGATC TCACCGACGG GGCCAATTAC
TTAGTCGAAC AAGGTATTGC CGATAAACAA CGTTTAGGGA TCTTCGGCGC CTCCTACGGT
GGTTATGCGG CACTGTCTGG TGCGACCTTT ACACCTGACT TGTACCAAGC GGTGATCGCT
TACGTGGGGC CATCGAGCCT AGTGACGCTG ATGAATTCCT TCCCCGACTA CTGGCGCCCC
TACTTAGGCC AATGGTTTGA GTCGGTGGGC GATCCGCAAA TTGCCGAGCA GAAGCAAGAT
ATGGAAAAGC GCTCGCCAAT TAACTATGTC GATAATATCA AGGCGCCATT GATGCTGATC
CAAGGGGCGA ACGATCCACG CGTCACCCAA ATTGAGTCGG ATAATATCGC CAAGAAGATG
TATCAAAAGT CTTTGCCCGT TAAGTACGTA CTAGCAAAAG ATGAAGGACA TGGCTTTAGT
AAACGTGCCA ACAAACTGGC ATCGATTGTC GCCACCGAAC AGTTTTTTGC TGAGCATTTA
GGCGGGCGTG TCGATACGAA TGTGAACCCC GACATTCTAA AACACTTAGA CAGCCTGAAC
GTCGATATCA GTAAACTCTA A
 
Protein sequence
MQKFPFTSQL CSAAIAAALL LTGCTTADVR NEQPQVAATQ QTEAPLIPIE NFFNEQSIRH 
LKMSDDGKWL AFVKEYQGAS NIYLMADKSD LASATPLTTS VEPIRAFEWS AKGNDLFFMK
DKGGNENTQI YKLSFEEHAG KITAKEQRLT HKDDVQYSVL EQVKDNPDLL VVQANHDDSS
RMDIYLLNIN DGKLTPILKN ELSFTQVKFN KQGQPVIASS SNLDNTNALY VQIDGNWRKI
IQSAKGESID ILKVNDDKKL AYISANIGDR DKQELLKVDL MTGKYETIHR DPDNEADVFA
VQFSDAGEPL AVGYYGGRLR VYPLDAEFTR HWDVINRHFN QDVEITIGEM NEKTNLWQIH
VASDRAAGAD YQYNAATGDI HLLVDIPASI PADQLSPRQS IVYTARDGVK IQAYLTLPKG
KQTQLPTIIL PHGGPWARDF WTLDSGYFHA IAQFYANRGY AVLQPNFRAS TGFGKKFLNL
GNNNWGIGSM QHDLTDGANY LVEQGIADKQ RLGIFGASYG GYAALSGATF TPDLYQAVIA
YVGPSSLVTL MNSFPDYWRP YLGQWFESVG DPQIAEQKQD MEKRSPINYV DNIKAPLMLI
QGANDPRVTQ IESDNIAKKM YQKSLPVKYV LAKDEGHGFS KRANKLASIV ATEQFFAEHL
GGRVDTNVNP DILKHLDSLN VDISKL