| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0457 |
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| Symbol | |
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| ID | 4476686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 532535 |
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| End bp | 533491 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639724992 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_868105 |
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| Protein GI | 117918913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA ACAAACGCTT TATCGCCGTT GGCGCAGCAT TAACACTCTC GCTCAGCGCT
GCCTCAATGG CGGCCGCACC TGCCTTTATC AATATCTTAA CTGGCGGCAC CAGTGGCGTG
TATTACCCCA TTGGTGTGGC ACTGTCGCAG CTCTATGGCT CAGGCATTGA AGGCGCTAAA
ACCTCAGTGC AAGCCACTAA AGCCTCGGTT GAAAACCTCA ACTTGCTGCA AGCGGGTCGT
GGTGAATTGG CCTTAGCCTT AGGCGACTCG GTCGCTGCAG CCTATCAAGG CGATGCCGAT
GCCGGCTTTA AAAAACCATT AGACAAAGTG CGCGTGCTCG CAGCCGCTTA TCCTAACTAC
ATTCAAATTG TGGCCAATAA AGAATCTGGC ATCAAAACCT TAGCCGATTT GAAAGGTAAA
CGTATTTCTG TTGGTGCGCC TAAGTCGGGT ACTGAACTCA ACGCGCGCGC AATTTTTAAA
GCCGCGGGAT TAAGCTACGA AGACATGGGC AAAGTGGAAT TTTTACCCTA TGCCGAATCG
GTCGAGCTGA TTAAAAACCG TCAGTTAGAC GCGACCCTAC AATCCTCGGG CTTAGGTATG
GCGGCGATCC GCGATTTAGC CGCGACTATG CCAATCAACT TTGTGGAAAT TCCCGAAGAT
GTGATCGGCA AAATCAATAA CCCAGCCTAT CAACATGGGG TGATCCCAGC AGCCACCTAC
GAAGGCCAAA CCGCCGATGT CTCTACGGTT GCGATTCAAA ACCTCTTTGT GACTCAAGCG
GGTGTGTCTG ACGATTTAGC CTATCAAATG ACTAAACTGA TGTTTGAACA TTTAGACCGC
CTCGGCAACG CCCACTCAGC GGCGAAAGCC ATTCAATTAG ACAAGGCCAC CAAAAACCTG
CCTGCGCCAC TGCACCCAGG TGCTGAGCGT TATTTCAAAG AAGTTGGCGC ACTCTAA
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| Protein sequence | MKINKRFIAV GAALTLSLSA ASMAAAPAFI NILTGGTSGV YYPIGVALSQ LYGSGIEGAK
TSVQATKASV ENLNLLQAGR GELALALGDS VAAAYQGDAD AGFKKPLDKV RVLAAAYPNY
IQIVANKESG IKTLADLKGK RISVGAPKSG TELNARAIFK AAGLSYEDMG KVEFLPYAES
VELIKNRQLD ATLQSSGLGM AAIRDLAATM PINFVEIPED VIGKINNPAY QHGVIPAATY
EGQTADVSTV AIQNLFVTQA GVSDDLAYQM TKLMFEHLDR LGNAHSAAKA IQLDKATKNL
PAPLHPGAER YFKEVGAL
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