Gene Shewana3_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0452 
Symbol 
ID4476681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp527814 
End bp528236 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID639724987 
Productthioredoxin 
Protein accessionYP_868100 
Protein GI117918908 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.531645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG CCTGCCCCCA CTGTGACACC TTAAACCGCG TGCCCCAAGA GCGGTTAACT 
GAGCAGCCGA CCTGCGGCAA ATGTAAACAA AATCTGTTTG CGGCGGCGCC CATTGAGCTC
ACGAGCGCCA ATTTTATCAA TCATGCTCAC AAGTCAGAGT TGCCACTCGT TGTCGATTTT
TGGGCGAGCT GGTGCGGCCC CTGCAAAAGC TTTGCGCCCA CCTTTTCGGC GGCGGCAAAA
GCATGGGAAC CACAATTTCG CTTTGGCAAG ATTAATACCG AGGAGCAACA GGCACTGGCG
GCACAATTTG GGATCCGCTC TATCCCTACG CTGATGATTT TCAAACAGGG GCATGTTATC
GCCCAGCAAG CGGGCGCCTT ACCCAAGCCG GCACTCGACC AATGGCTGCA TAGTTATTGT
TAA
 
Protein sequence
MIIACPHCDT LNRVPQERLT EQPTCGKCKQ NLFAAAPIEL TSANFINHAH KSELPLVVDF 
WASWCGPCKS FAPTFSAAAK AWEPQFRFGK INTEEQQALA AQFGIRSIPT LMIFKQGHVI
AQQAGALPKP ALDQWLHSYC