| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0431 |
|---|
| Symbol | |
|---|
| ID | 4479338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 498784 |
|---|
| End bp | 500826 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639724967 |
|---|
| Product | peptidase M13 |
|---|
| Protein accession | YP_868080 |
|---|
| Protein GI | 117918888 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000285059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.587511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TTAGCACACT GGCGCTGGGG ATTGCCCTGA GCCTAGGTTT AGCCGCTTGC
AGCAGCGAGC CTAAAACTGA AGTCGCCGCG GTTTCTGGCA TTGAATTACA AAACTTTGAT
GCCTCAGTTC GCCATCAAGA CGATTTTTAT TACAGCGTGA ACGGTAAATG GTTAGCGAAT
ACGCCTATCC CTGCCGACAA GTCTAACTAC GGTGCATTCT CTGTGCTGTA CGATCAAAGC
CAAGATGCGT TGAAAAAAAT CATCGATGCC GCCGCAGCGC AAAAAGATGC TGCTCCTGGC
TCTAATAATC AAAAAATCGG TGACTTTAAC GCCAGCTTTA TGAATACCGA TTTGCTCGAA
TCCTTAGGTG TAACCCCATT AAATCCATTA CTGGCGGACA TCTCTGCAGT GAAAAATCAC
AGTGAATTAC CCGCGGTGAT GGGGAAATTA CTCACCAGCG GTTCAGGTAT TCCCTTTGGT
TTCTACGTTA ATAACGACGC GAAAAATTCT ACCCAATATG CAGTGTATTT AAGCCAGTCG
GGCTTAACCT TGCCAGACCG CGATTACTAC TTAAAAGATG ACGCTAAGTT TGTCGCTAAT
CGCCAAGCAA TGGCGAAATA TGTGACTGAT ATTCTGACTG AAGCAGGCTA TAAAAATGCA
AAACGTGCCG CGAAAAACGT AGCCGACATC GAGATGATGA TCGCTAAGAG CCAGTGGAGC
CGCGTTGAAT CTCGCGATGC TAACAAGTCT TACAACAAAC TGAGCCGTGC CGAGCTGCAA
AAACTCACTG GCAAGTTTGA TATCAATGCC TTTGCGACCA GTGCGGGCCT TGGCGATAAA
GTGACTGAAG TCATCGTGCG TCAGCCATCA TACTTAGAAA AGTTAGGCGC TAATTTTGAT
GCCTTCCCCG TTTCAGCTTG GCAGGATTAC TTAACGTTCC ACTTAGTGGA TAGCTATGCT
GAGCTGTTAA GCAAAAACTT CGTTGACCTT AACTTTGCCT TTAAAGGCAA AACCTTAATG
GGTATTGAAG AACAACAACC ACGTTGGAAA AAGGCGGTAG ATGGCGCCGA CCAAGTGATT
GGTGAGTTAG TCGGTGAGGA GTACGTTAAG CAATATTTCA AACCAGAAGC AAAAGCCCGC
ATGGAAACCA TGATCAAAAA CTTGATCAAA GCTTTTGAAG TCAGCATCAA CGAACTCGAG
TGGATGACGC CTGAAACGAA AGTCGCGGCT CAAGAAAAAC TGTCTAAGTT TACCTACAAG
ATTGGTTATC CAGACAAGTG GAAAGACTAC ACAGCGTTAG AGATCAAGCC TGATGAGCTG
GTGGGTAACT ATATGCGTTA TGCCAACTTC GAATATCAAG ACATGATCAA CAAGTTAGGT
AAGCCAATCG ATCGTACCGA GTGGCATATG ACACCACAAA CGGTGAACGC TTATTACAGC
CCTGTTGGCA ATGAAATCGT ATTCCCTGCG GCGATTCTGC AACCGCCATT CTTCAATATG
GAAGCCGATG ATGCGGTTAA CTACGGTGGT ATCGGTGCGG TAATTGGCCA CGAAATCAGC
CATGGTTTCG ACGACCAAGG TGCTAAGTAC GATGGCGACG GCAACCTGCG TGATTGGTGG
TCTGATAAAG ACCGTGAAGA GTTCCAAAAA CGCGGTAAGC AACTGTCGGC GCAGTATTCT
GGCTATGAAG CGTTGCCCGG TAAGTTTGTG AACGGTGATT TAACCTTAGG CGAAAACATT
GGTGACTTAG GCGGGTTAAC CGTAGCGGCG CGTGCCTATG CGATGAGCTT AAACGGTAAA
CCTGCACCAG TGCTCGATGG CTTAACGGGT GAGCAGCGTT TCTTCGTCGG TTGGTCACAA
GTGTGGCGCC GCAACTACCG TGATGAAGAG TTAGGTCGTC GTTTACTGAC GGATCCGCAT
TCACCTAGCC ACTACCGTGC TATGGGTACA CCGCGCAATA TTGAAGCCTT CTATAAAGCT
TTTGAGCTGA AAGAAAGCGA CAAGATGTAT TTAAAACCAG AAGAGCGCGT AAAAATCTGG
TAA
|
|---|
| Protein sequence | MKKISTLALG IALSLGLAAC SSEPKTEVAA VSGIELQNFD ASVRHQDDFY YSVNGKWLAN
TPIPADKSNY GAFSVLYDQS QDALKKIIDA AAAQKDAAPG SNNQKIGDFN ASFMNTDLLE
SLGVTPLNPL LADISAVKNH SELPAVMGKL LTSGSGIPFG FYVNNDAKNS TQYAVYLSQS
GLTLPDRDYY LKDDAKFVAN RQAMAKYVTD ILTEAGYKNA KRAAKNVADI EMMIAKSQWS
RVESRDANKS YNKLSRAELQ KLTGKFDINA FATSAGLGDK VTEVIVRQPS YLEKLGANFD
AFPVSAWQDY LTFHLVDSYA ELLSKNFVDL NFAFKGKTLM GIEEQQPRWK KAVDGADQVI
GELVGEEYVK QYFKPEAKAR METMIKNLIK AFEVSINELE WMTPETKVAA QEKLSKFTYK
IGYPDKWKDY TALEIKPDEL VGNYMRYANF EYQDMINKLG KPIDRTEWHM TPQTVNAYYS
PVGNEIVFPA AILQPPFFNM EADDAVNYGG IGAVIGHEIS HGFDDQGAKY DGDGNLRDWW
SDKDREEFQK RGKQLSAQYS GYEALPGKFV NGDLTLGENI GDLGGLTVAA RAYAMSLNGK
PAPVLDGLTG EQRFFVGWSQ VWRRNYRDEE LGRRLLTDPH SPSHYRAMGT PRNIEAFYKA
FELKESDKMY LKPEERVKIW
|
|---|
| |