| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0417 |
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| Symbol | |
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| ID | 4479324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 474440 |
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| End bp | 475369 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639724953 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_868066 |
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| Protein GI | 117918874 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.167807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00108139 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGACTG ACTTTATTTC TCTTTTAAGC CACTCTCTAG CTCAGAGTCC TTGGCTGTTT
ATTACGTTAA GTTTTGTGTT TGCCGCCACT ATTGGCAGCT TTTTAAATGT CGTCATTCAC
CGCTTTCCGG TGATGATGAA GCGCGAGTGG CAACAGGAGT GCAATCAATA TCTACAGGAA
TATCATGCAG ATGTAGTAGA GCAGATTGGT ATCGAAAAGC TCAACAAGCC GATAGATACT
TACCCTGAAA AATACAATCT CGTGGTGCCA GGTTCCGCCT GTCCTAAATG TAAGACCGCA
ATCAAACCTT GGCATAATTT GCCGATTGTG GGCTGGTTAA TGCTCAGGGG AAAATGCGCC
GCCTGCAATA CAGCAATCTC CTCTCGCTAT CCGATTATTG AGTTAGTAAC AGGATTACTC
GTTGCAACGC TCGCTTGGCA TTTTGGTCCT AGCTGGCAAT TTGTGTTTGC TGCGGTATTA
ACCTTTGTAT TGATTGCATT AACGGGTATC GATCTGGATG AGATGCTGCT TCCCGACCAG
ATGACCCTTC CACTCCTATG GCTAGGATTA CTCATTAACC TCAACCATAC CTTTACTACT
CCAACCGATG CCGTTATAGG TGCTGCAGCG GGCTATTTGA GTCTCTGGTC AGTATTTTGG
CTGTTTAAGT TGCTCACAGG TAAAGAAGGC ATGGGTTATG GCGACTTTAA ACTGCTCGCC
GTATTTGGTG CATGGCTAGG TTGGCAAATG CTCCCCCTAG TCATTTTACT ATCCTCTTTA
GTTGGTGCCC TTGTCGGCAT CACGCTCATC GTACTCAAAC GTAATCAGCT AGCCAATCCA
ATCCCCTTTG GGCCCTATAT TGCCGCTGCA GGTTGGATAG CCCTGATATG GGGACAACCT
ATAGTCGATT GGTATCTAAG TACGCTATAA
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| Protein sequence | MMTDFISLLS HSLAQSPWLF ITLSFVFAAT IGSFLNVVIH RFPVMMKREW QQECNQYLQE
YHADVVEQIG IEKLNKPIDT YPEKYNLVVP GSACPKCKTA IKPWHNLPIV GWLMLRGKCA
ACNTAISSRY PIIELVTGLL VATLAWHFGP SWQFVFAAVL TFVLIALTGI DLDEMLLPDQ
MTLPLLWLGL LINLNHTFTT PTDAVIGAAA GYLSLWSVFW LFKLLTGKEG MGYGDFKLLA
VFGAWLGWQM LPLVILLSSL VGALVGITLI VLKRNQLANP IPFGPYIAAA GWIALIWGQP
IVDWYLSTL
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