Gene Shewana3_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0415 
Symbol 
ID4479322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp473002 
End bp473736 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content49% 
IMG OID639724951 
Producthypothetical protein 
Protein accessionYP_868064 
Protein GI117918872 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000349234 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGACT TAGTTTATGA ACAGCCTTTA AATGAGAAAA TCCGTAGCTA CTTGCGGCTC 
GAATATCTCA ATAAACAGCT CAGTAATAAC CTAAATCACG ACCACCAACA TAGATGTTTC
TACCCTCTTT TCTCCCTGTG CGAATTATCG GAGCGTTGCG ACTATCGCAA TGAGGTCCTT
AAAGATATCG AACGCAATCT GCTACAACTA AGCAAATGGC AAGAGCTCGA CCATGCCGAT
AGCGAACAGA TTGAGTTTTA CATTCAAGCA TTAATGCAAG CCAGAGAGCC ACTTCAGCGT
CCCGAGCGCT GTGGTAGTCA ACTCAAACAA GACCGTTTTT TATCGGCTCT GCGACAGCGT
TTTGGTATGC CAGGCGCCTG CTGCAACTTC GATCTTCCCC AACTGCATTT TTGGCTCGCC
AAACCTTGGG AAGAAAGACA GCAAGATTAC CAAGCTTGGA TCAGCCATTT TGATCCTTTA
CTCAATCCCA TCACGCTTTT GCTTCAGTTA ACTCGCAGTA CCGCCCATTT CGATAATGCC
ACCGCCCATG CCGGTTTTTA CCAAGGTGAC AGCGCTCAAG CACTCTCGCT AGTGCGAGTC
AAAGTCGATG CCGCCCACGG CTGCTACCCC ACCATCAGTG GCCATCGCAA TCGCTACGCC
ATCCACTTTG TGCAATTCGA CCAACAGCGC CACTCTGACC GCAGCATCGA ATTCCTACTA
GCGACCTGTG CTTGA
 
Protein sequence
MTDLVYEQPL NEKIRSYLRL EYLNKQLSNN LNHDHQHRCF YPLFSLCELS ERCDYRNEVL 
KDIERNLLQL SKWQELDHAD SEQIEFYIQA LMQAREPLQR PERCGSQLKQ DRFLSALRQR
FGMPGACCNF DLPQLHFWLA KPWEERQQDY QAWISHFDPL LNPITLLLQL TRSTAHFDNA
TAHAGFYQGD SAQALSLVRV KVDAAHGCYP TISGHRNRYA IHFVQFDQQR HSDRSIEFLL
ATCA