Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0415 |
Symbol | |
ID | 4479322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 473002 |
End bp | 473736 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639724951 |
Product | hypothetical protein |
Protein accession | YP_868064 |
Protein GI | 117918872 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000349234 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGACT TAGTTTATGA ACAGCCTTTA AATGAGAAAA TCCGTAGCTA CTTGCGGCTC GAATATCTCA ATAAACAGCT CAGTAATAAC CTAAATCACG ACCACCAACA TAGATGTTTC TACCCTCTTT TCTCCCTGTG CGAATTATCG GAGCGTTGCG ACTATCGCAA TGAGGTCCTT AAAGATATCG AACGCAATCT GCTACAACTA AGCAAATGGC AAGAGCTCGA CCATGCCGAT AGCGAACAGA TTGAGTTTTA CATTCAAGCA TTAATGCAAG CCAGAGAGCC ACTTCAGCGT CCCGAGCGCT GTGGTAGTCA ACTCAAACAA GACCGTTTTT TATCGGCTCT GCGACAGCGT TTTGGTATGC CAGGCGCCTG CTGCAACTTC GATCTTCCCC AACTGCATTT TTGGCTCGCC AAACCTTGGG AAGAAAGACA GCAAGATTAC CAAGCTTGGA TCAGCCATTT TGATCCTTTA CTCAATCCCA TCACGCTTTT GCTTCAGTTA ACTCGCAGTA CCGCCCATTT CGATAATGCC ACCGCCCATG CCGGTTTTTA CCAAGGTGAC AGCGCTCAAG CACTCTCGCT AGTGCGAGTC AAAGTCGATG CCGCCCACGG CTGCTACCCC ACCATCAGTG GCCATCGCAA TCGCTACGCC ATCCACTTTG TGCAATTCGA CCAACAGCGC CACTCTGACC GCAGCATCGA ATTCCTACTA GCGACCTGTG CTTGA
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Protein sequence | MTDLVYEQPL NEKIRSYLRL EYLNKQLSNN LNHDHQHRCF YPLFSLCELS ERCDYRNEVL KDIERNLLQL SKWQELDHAD SEQIEFYIQA LMQAREPLQR PERCGSQLKQ DRFLSALRQR FGMPGACCNF DLPQLHFWLA KPWEERQQDY QAWISHFDPL LNPITLLLQL TRSTAHFDNA TAHAGFYQGD SAQALSLVRV KVDAAHGCYP TISGHRNRYA IHFVQFDQQR HSDRSIEFLL ATCA
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