Gene Shewana3_0411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0411 
Symbol 
ID4479318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp470567 
End bp471493 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content48% 
IMG OID639724947 
ProductPpx/GppA phosphatase 
Protein accessionYP_868060 
Protein GI117918868 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00590045 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAACAC CCGCTTATGC CGCCATTACT TTAGGCTCTA ATAGCTTTAA TATGCTGATC 
GCTAAGACAA AAGGCGGTCA GCCACAGATT ATTGCTAAAT ACAAACGTAA AGTAAGGTTA
GCCGAAGGCA TTGGCGAAGA TGGTCATTTA ACCGCAGAAG TGATGCAGCG TGGCCTAGAT
TGTCTAGCGA TGTTTGCCCA AATGTTGGCG CTGCATAAAA TCCATCCTAA TCATGTCGCT
GTGATTGCCA CCGCGACACT GCGCTGTATC CATAATGCCG ATGAGTTTAA TCAAAAGGCT
ATTCCGCTCT TGGGTCATCC GATTGAGATT ATCTCAGGCA TGCGTGAGGC TGAGCTTATT
TATCAAGGCA TGGTGGCGAC CACTTGTGGC CAAGGTCGAC GTTTAGTGAT CGATATTGGT
GGCGCGAGTA CCGAGTTTAT AATCGGTGAT GGCCACCAAG TTCAGTTTAA GACTAGCTTA
CCCATGGGCA GCGTGACCTT TAACCGTCGC TTCTTTAACA ATGCCCCGTT GCAAGAGCTC
GATTTTGACG ATGCCAAGCA GGAAGTGTTC GAAGTCTTAG GTGAACATAG GCAAAGGTTA
AAAGACTTAG GATGGCACTG TGTGGTGGGG GCTTCTGGCG CGGTGCAATC TGTAGTCGAA
GTCTTAATGC ACCGTAAGCA GTCTGAAATC ATTACTTTAG CTGTGTTGAC ACAGCTTAAA
GCGGAAATCC TTGCCGAAGA ACATGCCAGC CTTATGGGGA TTCTCGGCCT AAGTGCCGAA
CGCGCACCGA CATTTGCTGC AGGAGTGGCA ATTTTACTCG CACTCTTTGA ATTCTTGGGC
ATTGAGCAGT TGGCGCTATC AGGCGGCGCA CTGCGTGAAG GGGTGTTAGT GATGCTGGCG
CAGCGAATTT TAGAAGAAGC GATTTAA
 
Protein sequence
MPTPAYAAIT LGSNSFNMLI AKTKGGQPQI IAKYKRKVRL AEGIGEDGHL TAEVMQRGLD 
CLAMFAQMLA LHKIHPNHVA VIATATLRCI HNADEFNQKA IPLLGHPIEI ISGMREAELI
YQGMVATTCG QGRRLVIDIG GASTEFIIGD GHQVQFKTSL PMGSVTFNRR FFNNAPLQEL
DFDDAKQEVF EVLGEHRQRL KDLGWHCVVG ASGAVQSVVE VLMHRKQSEI ITLAVLTQLK
AEILAEEHAS LMGILGLSAE RAPTFAAGVA ILLALFEFLG IEQLALSGGA LREGVLVMLA
QRILEEAI