Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0410 |
Symbol | |
ID | 4479317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 469247 |
End bp | 470566 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724946 |
Product | ATP-dependent RNA helicase RhlB |
Protein accession | YP_868059 |
Protein GI | 117918867 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0117483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAA CACATTTATC TAATCAAAAA TTTGCCGACC TTCCTCTGCA TCCAGAGGTT AAACAGGCAC TTGCCGAAAA CGGCTTTGAA TTTTGTACGC CGATTCAGGC GTTATCATTA CCCGTATTAC TTCAATCAAA AGATATCGCC GGCCAAGCCC AAACGGGCAC GGGTAAGACA ATGGCGTTTT TGGTTGCCAC ATTTAACCAT TTATTGTCGA CGCCTGTCCC TGAAAACCGT CAGTTAAATC AGCCGCGCGC CATCATTATG GCTCCTACCC GTGAGCTGGC GATTCAAATC GCCAAAGACG CGATTCTCCT TGCCAAACAC AGCCACTTAA AAGTGGGCAT TGTTTATGGC GGTGAAAGCT ATGATGTGCA GCGCAAGACG CTCGATCAAG GTGTAGACAT TCTGATTGGT ACCACAGGTC GGATTATCGA CTACGTGCGC CAAGGCATTA TCAATCTCGG CGGTATTCAA GCGGTTGTGC TAGATGAAGC CGATCGCATG TTCGACCTCG GTTTTATTAA GGATATTCGT TTCTTATTCC GACGTATGCC CAGTGCCGAT CAGCGTCTGA ATATGCTGTT TTCGGCGACA CTTTCGATGA AGGTGCAAGA ACTCGCCTAC GATCATATGA ATGAACCTGT GAAAGTCGAA ATAGCCCCCG AAGAAAAAAC CTCCAAGAAC ATCAAAGAAG AAATTTTCTA TCCTTCCCAA GAAGACAAAA TGCGTTTGCT GCTGACGCTG ATTGAAGAAG ATTGGCCAGA GAAAGCCATT GTTTTTTCAA ACACTAAGCA CAGCTGTGAA AACCTATGGT CTTGGCTTGA AGGGGATGGC CATCGTGTCG GCCTGCTGAC GGGCGATGTG CCGCAGAAGA AGCGTATTCG CATTCTCGAG CAATTCACTC AAGGCCAATT GGATATTCTG GTCGCGACCG ACGTTGCGGC GCGCGGACTG CATATCTCCG ATGTTTCCCA CGTCTACAAT TATGATTTAC CTGATGATTG TGAAGATTAC GTTCATCGTA TTGGTCGTAC TGGGCGTGCG GGTAACAAAG GTGTATCGGT CAGTTTTGCC TGTGAAGAAT ACGCTCTGAA TTTGCCAGCG ATTGAAACCT ACATCAATCA CTCTATTCCT GTGAGTAATT ATGACCGTGA TGCCTTGCTG GAAGATATTC CGCCGCCGGT CAAAATTCAT CGCAGGCACC CTGCGGGAGC ACGTAATTTA CGTGAACGCT CAGGTGCAGG GCGACCACAA GGTGCCCATC GTAGTGGTGG ACGTCCACCT CGCCATGACA GGACGCGTAG ACAGCCTTAA
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Protein sequence | MSQTHLSNQK FADLPLHPEV KQALAENGFE FCTPIQALSL PVLLQSKDIA GQAQTGTGKT MAFLVATFNH LLSTPVPENR QLNQPRAIIM APTRELAIQI AKDAILLAKH SHLKVGIVYG GESYDVQRKT LDQGVDILIG TTGRIIDYVR QGIINLGGIQ AVVLDEADRM FDLGFIKDIR FLFRRMPSAD QRLNMLFSAT LSMKVQELAY DHMNEPVKVE IAPEEKTSKN IKEEIFYPSQ EDKMRLLLTL IEEDWPEKAI VFSNTKHSCE NLWSWLEGDG HRVGLLTGDV PQKKRIRILE QFTQGQLDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GNKGVSVSFA CEEYALNLPA IETYINHSIP VSNYDRDALL EDIPPPVKIH RRHPAGARNL RERSGAGRPQ GAHRSGGRPP RHDRTRRQP
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