| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0372 |
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| Symbol | |
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| ID | 4478950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 409534 |
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| End bp | 410652 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639724904 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_868021 |
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| Protein GI | 117918829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT GGACTCTAAG TATGCTAGCG ATCGCTGTAC TTGCCTTTGG CTCAGTGATC
GGCTTTAACC TGATGGTAAA AAGTAAAATC GCCGAGGCAA TCGCCAATAT GCCAGAGGCT
GAGTTTCCTG TAACAGCCAT GACATTAGAT ATGCAAAAGT GGCAACCCAC AATTGATGCG
ATTGGCTTTG TTGAGCCGCA TCAAGGGGTA ACCATCTCCA ACGAATTAGC AGGACGCGTC
ACCAGCATTA ATTTTGAAAA CGGTAGCCGA GTGGAAAAAG GCCAACTACT GGCCGAACTC
GATGCAAAAG TCGAAAGAGC CAACCTTAAA AGCAAAATGG TACAACTGCC CGCCGCTGAA
GCCGACTTTA AACGCCTATC AAAACTCTAT GCGCAAAAGT CAGTCTCTAA ACAGGATTTA
GACAATAGTG AATCTAAATA TCTGGCCTTA CAGGCGGATA TTGAAAGCTT AAAAGCCACT
ATCGAGCGCC GTGAAATCAG TGCGCCTTTC AGTGGTTTAG TGGGTATTCG TAACATTAAC
TTAGGTGAAT ATCTTCAGCC TGGTACCGAT ATTGTGCGCC TTGAAGATAT CAGCACAATG
AAAATCCGCT TTACCATTCC GCAAACCCAA TTACCTCGCA TTGCTGTAGG CCAAAAAATC
CATGTGTTTG TGGATTCTTA TCCTGAGCAA CCCTTCGAAG GTGAAATTGC CGCGATTGAA
CCCGCCGTGT TTTACCAAAG CGGTCTGATC CAAGTGCAAG CACGCATTCC GAACGATAAC
GCCAAACTGC GTAGCGGTAT GTTTGCCCGA GTCTCCATCC TGTTACCTGA ACTAGATAAC
CAGTTTGTAC TGCCACAAAC GGCCATCAAC TTTACCCTTT ATGGTAACTC TATTTACCTC
ATCAAAGAGG TCGAGGAAAA CGGTAAAAAA CTGGCTAGAG TCGAGCAAAT CAACCTGACG
GTATTAGAGC GTAACGGCAA TAACGCACTA GTGAGTGGCG CGTTAAAAGC GGGAGATCGC
ATTGTCACCT CGGGGCAAAT TCGCCTCAGT AACAACAGTA AAGTGACAGT TGTTGAAGAC
CAAGCCCTGA CCCACTCCGA CACTATGCCA AAGCTGTAA
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| Protein sequence | MKKWTLSMLA IAVLAFGSVI GFNLMVKSKI AEAIANMPEA EFPVTAMTLD MQKWQPTIDA
IGFVEPHQGV TISNELAGRV TSINFENGSR VEKGQLLAEL DAKVERANLK SKMVQLPAAE
ADFKRLSKLY AQKSVSKQDL DNSESKYLAL QADIESLKAT IERREISAPF SGLVGIRNIN
LGEYLQPGTD IVRLEDISTM KIRFTIPQTQ LPRIAVGQKI HVFVDSYPEQ PFEGEIAAIE
PAVFYQSGLI QVQARIPNDN AKLRSGMFAR VSILLPELDN QFVLPQTAIN FTLYGNSIYL
IKEVEENGKK LARVEQINLT VLERNGNNAL VSGALKAGDR IVTSGQIRLS NNSKVTVVED
QALTHSDTMP KL
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