| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0345 |
|---|
| Symbol | |
|---|
| ID | 4479081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 377739 |
|---|
| End bp | 378587 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639724877 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_867994 |
|---|
| Protein GI | 117918802 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.12739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAATC CAGTACCACA CAATGCCGAA TTTAATGTCG CTTATACGCT GCCTGAAAAA
CGCCGCGCGG GAATCAACTA TATTCCCCGT TGGCTCGGCG GCGTCAGTTG CTACATCGCC
TTTGGTCTCG GTGGACTGTT AAGCTCGTTA ACCATCTTGC CTCTGCTGCG TTTTTGGCCG
GGCACGCCCG AGGCGAGGAT TATCCGCGTG CAAAAAGCCG TGCACACTAT GTTTAAAGGC
TTTGTGGCCA TGTTGACTTG GGCGGGAGTT ATCCGAGTCA GCACCCATAA TGCCGAGCTG
CTGCAAAATG CCAAGGGCGT GATAGTGATT GCCAATCACC CGAGTCTGGT CGATGTGGTA
GTTTTAATCA GCTTGATGCC CAATGCGGGC TGTATCGTTA AACAGGGCCT ATGGCGCAAT
CCCTTCTTAC GTGGCGTCGT CTCCTGCGCG GGATACATTC CCAATCGCGG CGCCGAGCTG
ATGCTCGAAG ATTGTCGCGA AGTGCTCGCC CGCGGCACGA ATCTGATTAT CTTTCCCGAA
GGCACGCGCA CTGTATTTGG TGCAAGCATT AACGAGTTTG CCCGCGGTGC CGCCAATATT
GCGATTCGCA CCCAAGCCGA TATTTTACCT GTGGTTTTGC GCACCAATGT GCGTGGTTTG
ACAAAGGAAC AACCTTGGTA TGAGATCCCA AGGCAAACCA TGGGAATGGC CGTCGAAATC
GGCAACACAA TTTCTCACCA AGGCTACCAA GCTCCATTGG GTGAGCATGC GAAAATGGCT
CGGCAATTAA CCCGAGACCT TGAACAATAC TATCAACAAC AACTCGAAAA TAATTATGAC
TTTACATAA
|
|---|
| Protein sequence | MPNPVPHNAE FNVAYTLPEK RRAGINYIPR WLGGVSCYIA FGLGGLLSSL TILPLLRFWP
GTPEARIIRV QKAVHTMFKG FVAMLTWAGV IRVSTHNAEL LQNAKGVIVI ANHPSLVDVV
VLISLMPNAG CIVKQGLWRN PFLRGVVSCA GYIPNRGAEL MLEDCREVLA RGTNLIIFPE
GTRTVFGASI NEFARGAANI AIRTQADILP VVLRTNVRGL TKEQPWYEIP RQTMGMAVEI
GNTISHQGYQ APLGEHAKMA RQLTRDLEQY YQQQLENNYD FT
|
|---|
| |