| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0340 |
|---|
| Symbol | |
|---|
| ID | 4479076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 375622 |
|---|
| End bp | 376017 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639724872 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_867989 |
|---|
| Protein GI | 117918797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.487576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT TAATTAACTC AAGCCGTAAG CGCACACAAC GAGATTACAC CTTAGCCTTT
AAATTAGGCG TTGTAGAGCG TGTTGAAAAA GGCGAAATGA CGTACAAACA AGCCCAAACC
CATTTTGGTA TTCAAGGCCG TTCAACGGTT CTCGTTTGGC TTAGAAAACA TGGTAGACTC
GATTGGTCGA AACCTTTTCA ACATCCCCTT ATGCCTAAAT CAAAAGAAAC CCCTGCCGAA
ACGATCAAGC GCCTTGAACG TGAGTTAGCA GAAGAGAAAC TGCGTAACCA AATCCTCAAT
GGCATGGTTG ATATCATGGA CAATGAATAT GGAGCTGGCC TCAGAAAAAA GTACTTATCC
GGTACGTCTG GCAAGCAAAA GGCAACGGAG AAATAA
|
|---|
| Protein sequence | MTTLINSSRK RTQRDYTLAF KLGVVERVEK GEMTYKQAQT HFGIQGRSTV LVWLRKHGRL
DWSKPFQHPL MPKSKETPAE TIKRLERELA EEKLRNQILN GMVDIMDNEY GAGLRKKYLS
GTSGKQKATE K
|
|---|
| |