Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0311 |
Symbol | rbn |
ID | 4479470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 349274 |
End bp | 350287 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639724843 |
Product | ribonuclease BN |
Protein accession | YP_867960 |
Protein GI | 117918768 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.415793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAAGA AGATAGAACT GGCACAAATT CAAGTCTTAT TCCTCGGGAT CTGGCGCTTC CTGCTGCATT TACGCCAGCG TTTAGTGGAA GATCAAATCA ATATCCGCGC CGGCCACTTA GCCTATGTCA CCCTGTTATC CCTTGTGCCT ATGGTGGCCG TGACTATGTC GATGCTGTCG GCTTTCCCTG TGTTTAAGGG GATCCGTGGC CAAATCGAAG CCTTCGTTTA TGAGAATTTT CTGCCCGCGG CGGGCGATAC GGTACAAGTC TATATTAATG AATTTGTTGG CAATGCCTCT AAGGGCACGG CAGTGGGGAT CGCGGCTCTG GTCGTGGTGG CGATTATGCT GATCTCCGCC ATCGATAAAT CGCTGAATAA TATTTGGCGT ACTAAGGAAA AGCGTTCAGT GGTGGTGGCC TTTTCCATGT ATTGGATGGT GATTACCTTA GGCCCAGTGC TGGTGGGCGC GAGCCTAGTG GCGACTTCCT ACGTGGTGTC ATTAAAACTG TTTGAGGGCG ACGCCTTATC TGGGGTGATG CCGCTATTTA TCGAGCGCTT GCCTATGCTG TTTTCGGTGG CAGCGTTTTT ACTGCTCTAT ATGGTGGTGC CGAATCAAAA GGTGAAGTTT TGGCATGCGC TATTAGGCGC GGTAGTGGCG GCCTTACTGT TCGAGTTGGG GAAAAAAGGC TTTGCCCTGT ATGTGACTAA ATTCCCAAGT TATGAGGCCA TTTACGGCGC ATTGGCGACC ATCCCTATTC TGTTTGTTTG GGTCTATTTA TCTTGGATGA TAGTGTTGCT GGGCGCCGAA ATTACCGCGG CCATGCCTGA GTATTTGGAC TATGAGTCTA GCAGCAATAT CAACGAAACC AATCTCGATG GTGAGCCTTT AGCGGCGCAG AATACACCCG CCGTGGAGCC AGAAACCATA TCTGCCCAAT CAAGCCAAGA GGTTGATACG ATGGGTGAAC TTGCCGCAAA CGCGCCGCAA TCGACTACAC TGGATAAGCC GTAG
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Protein sequence | MTKKIELAQI QVLFLGIWRF LLHLRQRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS AFPVFKGIRG QIEAFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA IDKSLNNIWR TKEKRSVVVA FSMYWMVITL GPVLVGASLV ATSYVVSLKL FEGDALSGVM PLFIERLPML FSVAAFLLLY MVVPNQKVKF WHALLGAVVA ALLFELGKKG FALYVTKFPS YEAIYGALAT IPILFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSNINET NLDGEPLAAQ NTPAVEPETI SAQSSQEVDT MGELAANAPQ STTLDKP
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