| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0299 |
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| Symbol | |
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| ID | 4479458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 331825 |
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| End bp | 334062 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724831 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_867948 |
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| Protein GI | 117918756 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000445581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000163743 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTAAGT CTATGGGGCC GATAAGCCTA GTCGCCGCCG CAGTTATCTG CCAACTGGGG
CTTATTAATG TGGCGACAGC CGCTGAAAAC GAGATGGAGC GCATGGTGGT CTCCGCCACC
CGTTCACCTA CCCAAATCAG CGATCTATCC AGCACAGTGT GGATCATTGA TGAAGCCAGC
ATTCGCGAGC AAACCGATAG CGGCAAAGGG ATTAAGGAAA TGCTCGCCGC CTTAGTGCCG
TCGATGGATG TGTCCAGCCA AGGGCGCACC AACTTTGGCC AGAATATTCG CGGTCGCGCC
ATGGTGGTAT TAATCGATGG CGTGTCGATG AACACCTCTC GCAGCATCAG CCGTCAGCTA
GACAGTATCG ATCCATTCAA TATTGCGCGC GTCGAGGTAC TGGCTGGCGC GTCGGCTATC
TATGGTGGTG GCGCACTGGG CGGTGCCATT AATATCGTCA CTAAAAAAGC GGCTGACAGC
AGTGATACCT TCGAGGCCGA AGCAGGATTT AAGTCCGGCT TTAATAGCAG TGATGATTTA
GATTATCGCA CCGCGCTGGC GGTTACCGGG GGCAGTGATT CGCTTAAGGG ACGCTTCAGC
GCCGCTTGGC AAGAAAACGG CCAGTGGTTT GATGGCAGTG ACAATCCTGT GATGCTGGAT
ATCTCGCAAA CCGGAATGCA GTACACCCAA GGTTATGATT TGATGGCGAA TATGGATTGG
CAGCTTGCCA ATGACGCCAG CCTCAGCGCC ATGGCGCAAT ACTATCGCAA TGGTTCAGAC
GAAGAACATG GCCTGTATAT GGGTGAGAAC TTCTCCGGTG TCACGGGCGA TGCCTCAGTG
CTGGAAACCC GTAAAGGATT GGACGCTGAC CGCAGCCCCG CCACCGAGCG TACTTTACTG
AATCTGTCCT ACTCCCAGGA TGAGTTTCTG GGTCAAACCC TGTATTTACA AGGCTTTTAT
CGCAAAGAGA ATCTGGATTT CCACCCGTTC CCCTATGTCA ATGAAACCAG TGGCGTCTAC
AACTTCTCTG CATCGGCCCA AAACACCAGC ATCTATGGTT TGAAAGCGGT CGTAGAATCC
AAACCCGTCG ATAGCCTCAC ACTCACTTGG GGACTGGATT GGGATAAAGA AAGTTTTGAT
TCGAACCAAA TGAGCTTCGA CCTCAATGCC GCCAACCAAC ACGGCGGCTT AGTGATGCGC
GAGCTGTTCA CTACCGGCCG TTATGTCGAC TTTACGGTCG AGTCTATTGC GGCATTTATC
CAAAGCAGTT GGGAGATGAA TAGCTTTTTG GTGCTAAACG CTGGCTATCG TTATCAACAC
ATGGAAAACA GCGTTGATGA TTTTATCGGT TATAACCAGC AGGTGGCGAT CGCCTCCGGC
AAGGCTAAGG GGGCCGATGC CATTAAAGGC GGCAGCACCG ACTATAACAT CGGCTTAGTC
AACCTTGGCT TGGTGGCCAA GTTGAGCCAA GACCAACAAC TCTGGCTTGC CTATTCCCAA
GGCTTTGAGC TGCCAGACCT GTCGAAATAC TATGGCCGCG GCACCTACAA GGCCGATGCC
GATGGTTACT TACAGCTGCA AAATAGCATC AATATCAATG ATACCCGTCT TGACGGGATC
AAAACCGACT CCATGGAGCT GGGATGGCGT TATCTTGCAG ACCGTTGGCA GGCGCAAGCC
AGCGTCTACT ATGCCGTGTC TGACAAGGTC ATTGAGGTTA ACAGCAAAGA TCTGACCATC
AATGTCAAAG ACCAAGATAA GCGCAGCTAT GGCCTAGAGG CACAGCTTAA CTTTGATATC
ACCTCAGATT GGCAAGTCGG CACCAACCTG CATCTGGTAC GCAGTGAAGT GAAGGATGAA
GATCGCTGGA ACGATGAAAC CGTCACTTAT GCCTCACCCT CTAAGGCCAC TGCTTTTATT
GGCTGGCGCG GCGAGACACA GAAGATCCGT TTACAGGCAG AGCACAGTTT TAGCGCCGAA
TCTGACTATC GCTTCAAAAC CGACGATGGC CTAGCGAGTG AGCTTGATAG CTACACAACG
CTGGATTTAC TGGGCTCTAT CGATTTACCC GTCGGTACCT TGAGCTACGG CATCGAAAAC
CTGCTCGATA AAGACTACAG CACCCTGTGG GGCCAAAGAG CTGTGTACTT CTACAGCCCA
ACCTACGGCC CTGAGTCTAT GTTCGACTAC CACGGCCGTG GCCGCACCTT TGCCCTCAAT
TATCAACTGA GTTGGTGA
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| Protein sequence | MPKSMGPISL VAAAVICQLG LINVATAAEN EMERMVVSAT RSPTQISDLS STVWIIDEAS
IREQTDSGKG IKEMLAALVP SMDVSSQGRT NFGQNIRGRA MVVLIDGVSM NTSRSISRQL
DSIDPFNIAR VEVLAGASAI YGGGALGGAI NIVTKKAADS SDTFEAEAGF KSGFNSSDDL
DYRTALAVTG GSDSLKGRFS AAWQENGQWF DGSDNPVMLD ISQTGMQYTQ GYDLMANMDW
QLANDASLSA MAQYYRNGSD EEHGLYMGEN FSGVTGDASV LETRKGLDAD RSPATERTLL
NLSYSQDEFL GQTLYLQGFY RKENLDFHPF PYVNETSGVY NFSASAQNTS IYGLKAVVES
KPVDSLTLTW GLDWDKESFD SNQMSFDLNA ANQHGGLVMR ELFTTGRYVD FTVESIAAFI
QSSWEMNSFL VLNAGYRYQH MENSVDDFIG YNQQVAIASG KAKGADAIKG GSTDYNIGLV
NLGLVAKLSQ DQQLWLAYSQ GFELPDLSKY YGRGTYKADA DGYLQLQNSI NINDTRLDGI
KTDSMELGWR YLADRWQAQA SVYYAVSDKV IEVNSKDLTI NVKDQDKRSY GLEAQLNFDI
TSDWQVGTNL HLVRSEVKDE DRWNDETVTY ASPSKATAFI GWRGETQKIR LQAEHSFSAE
SDYRFKTDDG LASELDSYTT LDLLGSIDLP VGTLSYGIEN LLDKDYSTLW GQRAVYFYSP
TYGPESMFDY HGRGRTFALN YQLSW
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