| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0286 |
|---|
| Symbol | |
|---|
| ID | 4479194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 318683 |
|---|
| End bp | 320854 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639724818 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_867935 |
|---|
| Protein GI | 117918743 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000746849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000233468 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCA AAACCTCGTT TGTTGCCCTC GCCGTATTTG CGGCCCTCAC CCAGTCTGCC
GTCGCTCAAG AAACCCCTGA TACGGGAACG AATAAGAATA AAGACATCGA AAAGATCACT
GTCACCGCGA GCCGCATGGA TAAATCGCCA AGCTCGATCC CCAATACAGT GACTATTATC
GACCGCGTGC AACTCGAAGA GCAGTTCCGT ACCACTAAAG ATTTGTCGAC TATTATCGGT
AACTTAGCAC CTAGCTTTTC ACCCAGCCGT CAGAAGATGA GCAACACGGG CGAAACCCTG
CGTGGCCGTC CGCCATTAAT CATGATCGAT GGTGTCCCCC AATCCAACCC ACTGCGTAGT
GGTGGCCGTT CGGGACAAAC TATCGACCCC GCGATGATCG AGCGTATTGA AATTATCCAC
GGCGCCAATG CGATGCACGG CTTAGGCGCG CAGGGCGGCA TCATCAACTA CATCACCAAA
AAACCAACGG GTGATAACCA GCACGTGGTT AGCTTTGATG CCACGGTGCC CGATTCGCTC
AAATCTAACG GTGTGAGTTT TGGTGCCAGC TATGCGTTTT CGGGCGAATC CGATCTGATC
GATATGTTGG GTTCGGTGAG CTATCGCAAT AACGGCGTGT ACTACGATGC AAATCACGAT
GTGATTGGTG TGGACACAAC GCAAGGCGAG TCCATGGACA GCCAGAGCAA GGACTTCTTT
ATCAAACTCG GCCACAACTT TGCCGAATCG CGCTTAGAGT TGATGGTTAA CCATTACAAC
ATGGAGAACA ATGGCGATTG GATGCCTGTG AAAGGCGATA TCACCACTGG CAAGCCCACG
GGCGCAATCG AAGAAAAACA ACCTTGGGAA GCGGCGAACA ACCAAGTCAC GACGACTAGC
CTCACTTACA CCCACGAGAA CATTGCCGGC CAACAGCTGA GTGTCCAGCT ATTCAATCAG
GACTTCGAGG CAGTGTATGG CGGTGGCTGT AACAAGACCT TCTACGATCC TGCATTGGCA
AACAACAGTA ACTTAGTGCA ATGCGAAGGC CCTAAAGGCG AGAGCTGGTA CTATGAGCAA
TCGCGCAACT CTTCGGTCAA ATGGGGCTTA AAGACCTCGT TAATTGCGAA AAATATTGCC
GATACGGGTA TCGATGCCGC CTATGGTATC GACCTATTCC GCGATACCAC TGAGCAGGCT
TTAGTGCAGA CGGGTTTATC GTGGGTGCCT GAAAGCACCT ATGACAACTT CGCGCCTTAT
TTGCAGTTAG ATTATGATTT AATTACCGAT CTTACCCTAT CGACTGGCGT ACGCTACGAG
CACGCTAAGC TCAATGTCGA TGACTACAAG ACGCTCTATG GCGCGGGAAA TAAACAAATC
GAAGGGGGCG AAGCGAGTTT CGACGAAACC CTATTCAACA TAGGTATCTC CTACAAGATC
ACTCCAGATA TCCGCGTTTA CACTAGCTAT AACCAAGGCT TTGGTATGCC TGATATCGGC
CGTATTCTGC GCGACGGTAA CAGCTTCCCT GGAGCGAACC CCAGCATCAG CGACTCCCTA
TCTCTTGCAC CTATTGTGAC GGATAACGTG GAGTTTGGCG CCGATTACCA AGGTGAATAC
TTAAGCGCTA AGATTTCGTA CTACCGCTCA GCCACGGATT ATGGCGCCCG TTTAGCCTTA
AACAGCGATG GCTTCTACGA CGTTAAACGT GAGAAGAGCG TGATTGATGG TATCGAAGCC
AATATTACAG CTTACCTGAC CAGCAACGAT GATCTGGGCA TGAATCTGGC GATCCAGCGC
GGTGAATACG ATTCGAATGA TGACAACAAA ACAGATACCG ATCTCGATGG TGCCAATATT
TCACCAAATC GTATCAACCT GTTCTGGACC CATAATTTCG ATAACGAGAT GTCGACGCGC
GTACAGGCAA ACTACTTTAT GGACCGTGAC TTCGAAGATG CCACAGGCGA GAAATATGCC
GAGTTTGATG GCTACACGAC TGTCGATGCG TCATTCTCTA TGCCGCTCTA CACTGGCACC
TTAACCTTAG GCGTGCAAAA CCTGTTTAAT AAGGATTATT TCAACTACTA CTCACAAACC
ATGGGTACAA ATGATCGTTA TTTCAAAGGC ATGGGCCGCA CTGCGACTAT CGGCTATACA
GTGGCATTCT AA
|
|---|
| Protein sequence | MTFKTSFVAL AVFAALTQSA VAQETPDTGT NKNKDIEKIT VTASRMDKSP SSIPNTVTII
DRVQLEEQFR TTKDLSTIIG NLAPSFSPSR QKMSNTGETL RGRPPLIMID GVPQSNPLRS
GGRSGQTIDP AMIERIEIIH GANAMHGLGA QGGIINYITK KPTGDNQHVV SFDATVPDSL
KSNGVSFGAS YAFSGESDLI DMLGSVSYRN NGVYYDANHD VIGVDTTQGE SMDSQSKDFF
IKLGHNFAES RLELMVNHYN MENNGDWMPV KGDITTGKPT GAIEEKQPWE AANNQVTTTS
LTYTHENIAG QQLSVQLFNQ DFEAVYGGGC NKTFYDPALA NNSNLVQCEG PKGESWYYEQ
SRNSSVKWGL KTSLIAKNIA DTGIDAAYGI DLFRDTTEQA LVQTGLSWVP ESTYDNFAPY
LQLDYDLITD LTLSTGVRYE HAKLNVDDYK TLYGAGNKQI EGGEASFDET LFNIGISYKI
TPDIRVYTSY NQGFGMPDIG RILRDGNSFP GANPSISDSL SLAPIVTDNV EFGADYQGEY
LSAKISYYRS ATDYGARLAL NSDGFYDVKR EKSVIDGIEA NITAYLTSND DLGMNLAIQR
GEYDSNDDNK TDTDLDGANI SPNRINLFWT HNFDNEMSTR VQANYFMDRD FEDATGEKYA
EFDGYTTVDA SFSMPLYTGT LTLGVQNLFN KDYFNYYSQT MGTNDRYFKG MGRTATIGYT
VAF
|
|---|
| |