Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0279 |
Symbol | |
ID | 4479187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 312962 |
End bp | 313642 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724811 |
Product | molybdate ABC transporter, inner membrane subunit |
Protein accession | YP_867928 |
Protein GI | 117918736 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4149] ABC-type molybdate transport system, permease component |
TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000025705 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATTGGC AGGCACTCTG GTTATCGGTC AAGCTCAGTA GCATCACGGT ATTGGTGTTG ATCCCGCTGG CGATTCTGGC GGGGCGAGCC TTAGCCTATC GTCAGTTTGT GGGTAAGTCC TGGGTTGAGG CCTTCATCAT GGTGCCCTTA GTCTTACCGC CGACTGTGAT TGGCTATTAC TTGCTAGTAG GGCTTGGCAG TCAAAGCTGG TTAGGGCAAT GGTTAGAGCG CTTAACCGGG CAGCAATTAG TGTTTCATTT CTCGGGGTTA GTGCTGGCGT CCGTGTTGGT GAATATCCCC TTTGCGTTGC AACCGATACA ACGCGCCTTT GAAGCAGTTC CCCATGATGT GCGCGATGCT GCAGCCTGTT GCGGCATGAG CAAACTTAAA ATTCTGCTAA AAATTGAATT GCCTATGGTA TGGCCAGGGG TATTGACCGC CTTAGTGCTG TGTTTCTCCC ATGTACTCGG TGAGTTTGGG GTCGTATTGA TGATGGGCGG GAATATTGCC GGCGAGACCA AGACTATCTC GATTTCCATC TACGACAGTG TTCAGGCCTT TGATTTTGGC GCAGCAGGCA CTATGTCATT GGTGCTGTTG TTATTTGCGA TTACGGCATT GGCCCTCACC ACCAGTTTAT CGCGGCGTTT AGGAGGTCAG CGTGGCGCAA ATCATCGCTG A
|
Protein sequence | MDWQALWLSV KLSSITVLVL IPLAILAGRA LAYRQFVGKS WVEAFIMVPL VLPPTVIGYY LLVGLGSQSW LGQWLERLTG QQLVFHFSGL VLASVLVNIP FALQPIQRAF EAVPHDVRDA AACCGMSKLK ILLKIELPMV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTISISI YDSVQAFDFG AAGTMSLVLL LFAITALALT TSLSRRLGGQ RGANHR
|
| |