Gene Shewana3_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0279 
Symbol 
ID4479187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp312962 
End bp313642 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID639724811 
Productmolybdate ABC transporter, inner membrane subunit 
Protein accessionYP_867928 
Protein GI117918736 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000025705 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTGGC AGGCACTCTG GTTATCGGTC AAGCTCAGTA GCATCACGGT ATTGGTGTTG 
ATCCCGCTGG CGATTCTGGC GGGGCGAGCC TTAGCCTATC GTCAGTTTGT GGGTAAGTCC
TGGGTTGAGG CCTTCATCAT GGTGCCCTTA GTCTTACCGC CGACTGTGAT TGGCTATTAC
TTGCTAGTAG GGCTTGGCAG TCAAAGCTGG TTAGGGCAAT GGTTAGAGCG CTTAACCGGG
CAGCAATTAG TGTTTCATTT CTCGGGGTTA GTGCTGGCGT CCGTGTTGGT GAATATCCCC
TTTGCGTTGC AACCGATACA ACGCGCCTTT GAAGCAGTTC CCCATGATGT GCGCGATGCT
GCAGCCTGTT GCGGCATGAG CAAACTTAAA ATTCTGCTAA AAATTGAATT GCCTATGGTA
TGGCCAGGGG TATTGACCGC CTTAGTGCTG TGTTTCTCCC ATGTACTCGG TGAGTTTGGG
GTCGTATTGA TGATGGGCGG GAATATTGCC GGCGAGACCA AGACTATCTC GATTTCCATC
TACGACAGTG TTCAGGCCTT TGATTTTGGC GCAGCAGGCA CTATGTCATT GGTGCTGTTG
TTATTTGCGA TTACGGCATT GGCCCTCACC ACCAGTTTAT CGCGGCGTTT AGGAGGTCAG
CGTGGCGCAA ATCATCGCTG A
 
Protein sequence
MDWQALWLSV KLSSITVLVL IPLAILAGRA LAYRQFVGKS WVEAFIMVPL VLPPTVIGYY 
LLVGLGSQSW LGQWLERLTG QQLVFHFSGL VLASVLVNIP FALQPIQRAF EAVPHDVRDA
AACCGMSKLK ILLKIELPMV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTISISI
YDSVQAFDFG AAGTMSLVLL LFAITALALT TSLSRRLGGQ RGANHR