| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0249 |
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| Symbol | |
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| ID | 4479157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 279335 |
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| End bp | 280096 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639724781 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_867898 |
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| Protein GI | 117918706 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000125391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACAG CTCCCATCGC GCTGATCACT GGTGCAAGCC GTGGCTTAGG TAAAAATGCG
GCCCTGACCT TAGCCGCACA AGGTGTTGAT ATTATTCTAA CCTACCAAAG CAATGCCGCT
GCAGCCGCCG AGGTGGTTGC GGAAATTGAA TGGCATGGAC GCAAGGCCGT CGCTTTACCG
TTAGATGTGG GTGATAGCCA GTCCTTTAGT GATTTTTCGC TGCGCGTAAA AGCCGCACTC
GAACAGACTT GGCTGCGGGA TAGTTTTAAC TATCTAGTTA ATAATGCTGG GATTGGTATC
CATGTTCCCA TGGCTGAAAC CAGTGTGGAG CAGTTCGATA CTCTGATGAA TATCCATGTC
AAAGGCCCCT TCTTTTTAAC TCAGGCGTTG CTGCCTCTGC TTGCCGATAA TGGCAGTATT
ATCAATGTCT CTACGGGGTT AACGCGCTTT GCAGTCCCAG GGTTTGGTGC CTACGCCATC
ATGAAAGGCG CGGTCGAAAC CATGACCAAA TACTGGGCGA AGGAGCTAGG GCCACGCGGG
ATTCGCGTCA ATGTGCTGGC TCCCGGTGCA ATTGAAACGG ACTTTGGTGG TGGTGCCGTG
CGGGATAATC CAAAAATGAA TGAGTTTTTA GCGCAGCAAA CGGCTTTGGG GCGGGTGGGA
TTACCCGAGG ATATTGGCGG CGCAATCAGT GTCTTGTTGT CACCCGCCGC GGCGTGGATA
AACGCCCAGC GTATCGAGGC TTCTGGCGGT ATGTTCTTAT AG
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| Protein sequence | MNTAPIALIT GASRGLGKNA ALTLAAQGVD IILTYQSNAA AAAEVVAEIE WHGRKAVALP
LDVGDSQSFS DFSLRVKAAL EQTWLRDSFN YLVNNAGIGI HVPMAETSVE QFDTLMNIHV
KGPFFLTQAL LPLLADNGSI INVSTGLTRF AVPGFGAYAI MKGAVETMTK YWAKELGPRG
IRVNVLAPGA IETDFGGGAV RDNPKMNEFL AQQTALGRVG LPEDIGGAIS VLLSPAAAWI
NAQRIEASGG MFL
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