Gene Shewana3_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0195 
Symbol 
ID4477967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp239060 
End bp239530 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID639724724 
Product30S ribosomal protein S7 
Protein accessionYP_867845 
Protein GI117918653 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0242327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000200344 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAGAC GTCGCGTTGT AGGACAACGT AAAATCCTAC CAGATCCAAA GTTTCACAGT 
GAGTTGCTGG CTAAGTTCAT CAACGTCATT ATGCAAGACG GCAAAAAGTC GACTGCAGAA
AAAATCATTT ACAAGGCGCT AGATGTTATC GCTGAAAAGA AAGGCGCTAA CCATTTAGAC
GTTCTTGAAG CAGCCCTGGA CAACGTACGC CCATCAGTCG AAGTTAAATC TCGTCGCGTT
GGTGGTTCTA CTTACCAGGT ACCATGTGAA GTTCGTCCTG TGCGTCGTAA CGCACTGGCG
ATGCGCTGGT TAGTTGAAGC TGCTCGTAAG CGTGGTGAAA AATCTATGGC TTTACGTCTA
GCAGGTGAAA TGCTAGATGC GTCTGAAAAC AAAGGTACTG CTGTTAAGAA GCGTGAAGAC
GTGCACCGCA TGGCTGAAGC TAACAAGGCC TTTGCTCATT ACCGTTGGTA A
 
Protein sequence
MPRRRVVGQR KILPDPKFHS ELLAKFINVI MQDGKKSTAE KIIYKALDVI AEKKGANHLD 
VLEAALDNVR PSVEVKSRRV GGSTYQVPCE VRPVRRNALA MRWLVEAARK RGEKSMALRL
AGEMLDASEN KGTAVKKRED VHRMAEANKA FAHYRW