Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0179 |
Symbol | |
ID | 4477942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 212709 |
End bp | 213806 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724699 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_867829 |
Protein GI | 117918637 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000167636 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.841341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAG CAGCAATGGA TCCCACGACC TATGATGCGC AACTAACGGC AAAGCGTATC AAGCTAGAGC AAGCCTTTGC CCAATTTGAG ACACCGAGTG TTGAAGTGTT TGCCTCAGAA CCTGCCCACT ATCGGATGCG CGCCGAGTTT CGCGTATGGC ACGAGGGCGA CGATTTATAC TATTACATGT TCGATAAAGT ATTGAACGAC AAAGTTCGTT GCGATCAATA CTTACCCGCG AGTGCCTTAA TCAATCAGAT GATGGCGGCT CTGATCACCG AGTTAAAACC GAACCACAGC CTACGCCATA AACTCTTCCA AGTTGATTTT TTATCAACGC TCAGTGGTGA GATTTTAGTG TCACTGCTGT ATCACAGACA GCTTGATGAT CAATGGCGCA GCGAAGCCGC TGCACTTAAA GCCAGATTGA GTAGCCAATT TAAGGTCAAT ATCATTGGCC GTGCGCGCAA ACAGAAAATC GATTTAGATA AAGACTTCGT GGTTGAGTCA CTGCAAGTGA ATGACAAAGT TTTCCATTAC AAACAAATCG AAAACAGCTT TACCCAGCCA AATGCCAAAG TGGCTATCAA GATGCTGGAG TGGGCTATCG ACGTGACTCA AAATAGCCAA GGGGATTTAC TGGAGCTTTA CTGTGGTAAT GGCAACTTCT CCATCGCGCT GGCACAAAAC TTTAATCGCG TGCTCGCAAC CGAGTTGGCT AAACCTTCAG TCGATGCTGC CCAGTACAAT ATCGAAGTCA ACAATATCGA TAATCTGCAG ATTATCCGTA TGTCGGCGGA AGAATTTAGC GATGCGATGG CGAAAAAGCG CAGCTTTAGA CGCTTAGAAG GCATAGATCT GGATAGCTAT GTCTGCAACA CCATTTTTGT CGACCCACCA CGAGCAGGTA TCGACCCTGC CACGTTGGAG TTAGTGCGAG GTTATGAGCG GATCCTGTAT ATCTCTTGTA ATCCCGACAC CTTGAAAGAC AATTTGCAGC AATTAAATCA GACTCATAAA GTCACCCGTT TTGCCCTGTT TGATCAGTTC CCTTATACCG ATCATATGGA AACAGGTGTA CTGCTTGAGC GTCGTTAA
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Protein sequence | MNLAAMDPTT YDAQLTAKRI KLEQAFAQFE TPSVEVFASE PAHYRMRAEF RVWHEGDDLY YYMFDKVLND KVRCDQYLPA SALINQMMAA LITELKPNHS LRHKLFQVDF LSTLSGEILV SLLYHRQLDD QWRSEAAALK ARLSSQFKVN IIGRARKQKI DLDKDFVVES LQVNDKVFHY KQIENSFTQP NAKVAIKMLE WAIDVTQNSQ GDLLELYCGN GNFSIALAQN FNRVLATELA KPSVDAAQYN IEVNNIDNLQ IIRMSAEEFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP RAGIDPATLE LVRGYERILY ISCNPDTLKD NLQQLNQTHK VTRFALFDQF PYTDHMETGV LLERR
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