Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0159 |
Symbol | |
ID | 4478296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 183125 |
End bp | 184312 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724679 |
Product | general secretion pathway protein L |
Protein accession | YP_867809 |
Protein GI | 117918617 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAC GGCTATTTAT TCGCTTAGGC AGAACCGCAG AGCAGGCATG CTCTTGGCTG GTTTGGTCCG AACAAGAACA AGAAATTATC GCCTCTGGTG AACTTGCCAA CGCCCAAGGT TTATCAACCT TAACCGAGCG CGCGGGAAAT CGGCCTATCG ATGTATTGGT GCCAGCCTCC GCTATGACGC TCACCAGCGT GAATCTGCCC GAAAAAGGCC AACGCCAAGC CTTAAAAGCC CTGCCTTTTA TGTTGGAAGA AACTATTGCC GACGATGTGG ATGCGATGCA CTTTACCGTT GGCCCGCGCA ATGGCGATGC CCTCAGTGTG GTGGCCGTTG CCCATGAGCA AATGCAAACT TGGCTCAGCT GTTTGGCCGA AGCGGGTTTA AAAGTGAAGC GTATCGTGCC TGATTGCCTC GCCTTGCCAT TGCAGGAATG CCAATGGGCG GCCATGCGTT TCGGTAACGA GTTATTACTG CGTACAGGAT TAGGGACTGG CCACAGTCTG CCTTTACCTT GGCTGCCAGT CGCGATGAAG CAACTGACGG CGCAGGCCGA CGAAGTGTCG GTCGCCAGTT ACACTGAGAT GGAGCTGGAC GGCGTTGAAC TTAAGCCACA GCCGCTCGAT TTACCTATGT TGGTACTGGC GCGTGGCATT TTACATGCGC CCATCAACTT ACTCACGGGT GTGTATACGC CGAAGCGCGA ATACAGTAAG CATCTGTTGC AGTGGAAAAA TGCCGCAATC GTGTTAGGTG TTGCCATTGT CTTGTCCTTA GTGAATAAGG GCTTAACCAT TCATCAGGTG AATGGTCAGA TTGCCGATTT GAAGGCGCAG AGTGAGGCCA TTTATCAACA AGTGGTGCCG GGGAATTCAC GCATTGTGAA TTTACGTTCG CAGATGGAAA GCCAATTACG AGCACTCCAA GGGCAAGGCA GTGGTGCTGA GTTTTTTGCG ATGCTCGATG GTTTACAGGA CGCCTTTAAA CAAGTGCCCG AGCTGAAACC AAACACCCTA AGATTTGAGA GCGCACGTAA TGAAATCCGT ATGCAAGTCA CGGCTAAGAA TTACGCGCAA ATTGAGAAGT TTAAAGAAAT AGTCGGCCGT CGCTTCCAAA TGGACGGCGG TACGATGAAC AGCGGTGAAG ATCAGGTCAC CAGCACCTTA ACCTTGAGGA GCAAATAA
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Protein sequence | MSERLFIRLG RTAEQACSWL VWSEQEQEII ASGELANAQG LSTLTERAGN RPIDVLVPAS AMTLTSVNLP EKGQRQALKA LPFMLEETIA DDVDAMHFTV GPRNGDALSV VAVAHEQMQT WLSCLAEAGL KVKRIVPDCL ALPLQECQWA AMRFGNELLL RTGLGTGHSL PLPWLPVAMK QLTAQADEVS VASYTEMELD GVELKPQPLD LPMLVLARGI LHAPINLLTG VYTPKREYSK HLLQWKNAAI VLGVAIVLSL VNKGLTIHQV NGQIADLKAQ SEAIYQQVVP GNSRIVNLRS QMESQLRALQ GQGSGAEFFA MLDGLQDAFK QVPELKPNTL RFESARNEIR MQVTAKNYAQ IEKFKEIVGR RFQMDGGTMN SGEDQVTSTL TLRSK
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