Gene Shewana3_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0095 
Symbol 
ID4478031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp105371 
End bp107278 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content51% 
IMG OID639724615 
Producthypothetical protein 
Protein accessionYP_867746 
Protein GI117918554 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC CGATGAAAAG AATAATAAAT GCTTTAATGC TGGCCATGTT AGCAACGGGC 
TGTAGCGATC CAAACCCAAC ACAGACCAAT CAAACCGCTG AGCAGGCCAA GGCCGAAAAG
GCCGTCCAAG TATTGAGCCT TAAGCAACAA CTCGCGCCAA TCACCCAGCG TTATTTTGCC
CTTAGACCCG AAATCGCCAC CTATTATGGC GTGGCCGAGG ATGAAGCAGG CAAGGATGTA
CTCTCTAAGC TGACCGATTA CAGCCCATCG GGGGAAAATC ATCGCCGTAA AGCGCTTAAG
GCCATATTAA CTGAACTCAA TGCTATCGAT GCCAGCCAGC TTAGCGCCTC GGAGCAAGTG
AGTTTAGGCT CGATAAAATC TGAAATCGCT GGCGCCCTGC TGCCAGCCGA AACCGTGGCC
TATGGCACTA TGCTCGGTGA ATACGGTGTT TGGTTTTTAC CATATGTTGT CAACCACTTA
TCTGGATTGC ATGTTGAATT TCCGGGGTAT ATGGAAGATA AGTTTGCGGT CACCACCCCT
GAGCAAGCTA AGGCCTATCT CAACCGCTTA ACCATGTATC CTGCCGCCAT GGGCACAGTT
ATCGATAAGC TAGATCAAGA CGTGCAAATG GGCGTGATCC CACCCGATTT TATTATCGAT
AAGACTATAG CCGTGTTGCA GCAACAATTA GTGCACCATG CTAATGAACA TCCCTTGGTC
AGCAGTTTTA AAGCCAAATT AACCGCCGCC CAAGTACCAG AAAGTGAGGC GTTGGTGAAC
TCAGCCGCCG AACTGGTGGA GACCAAATAT TACCCTGCGA CGCGCCAGTT GATTTCCGCA
CTGCAAGCCG TGCGCCTCAA GGCCACCCAT GTGGCGGGAC TCGGACACCA ACCTCAAGGC
GCTAAACTCT ACAAGGCGAT GATTAAGCAC CTCGCCAATT CGGAGATGAC CCCAGATGAG
ATCCACCAAC TTGGATTAGA CGAAGTTGCC CGCATTACCA CCGAGATGGA TGTGTTACTC
AAACAAGTGG GTTACCGCAA AGGCACAGTT GGCGAGCGCA TGCAGCGATT GCTTAAGGAT
CCTAAATACA TCTACCCCAA CACCGCCGAG GGTAAACAGC AATTAATGAC GGATATTCAC
GGCTATCTGA CGAAAGTGAA CGCCAAATTA CCGTTGTGGT TTGGGCTGTT ACCGAATCAA
GAGGTTGCGG TTGAAGCCGT GCCAGACAGT CGCGCCGCCG CAACCAGCGG TGCATTTTAC
GATGCGCCTT CTCAAGATGG TTCGCGTAAG GGCACCTTCT GGATAAGCCT GTACGATATG
GCGGCGCTGC CCTCCTATTC GCTGCAAACC TTAACCTACC ACGAGACCAA TCCCGGCCAT
CATCTACAGA CGCTCATCGG TCTGTCGGAT ACCTTGCCGC TGCTGAGTAC CATTTTTTAC
TCTAATGCCG CGGGAGAAGG TTGGGCGCTG TATGCAGAGC GCTTAGCCGC CGAGATGGGC
ATGTATCAGG ATAATCCGAT TAATGACCTT GGCCGCTTGC AGTCTGAGTT ACACCGCGCG
GTGCGCTTAG TGGTCGATAC GGGTATGCAT GCCAAGGATT GGAGCCGTGA GAAAGCCATT
GATTATGCAG TGGCGACTGA GGGAATACAC CTATCTGAAG CCACGGGCGA AATCGAGCGC
TATGTGGTTT GGCCGGGGCA AGCCTTAGGT TACAAGCTGG GCGAGCTGAA AATTATCGAA
TTGCGCACTA AGGCCAAAAA AGCCTTGGGC GATAAGTTTG ATATTAAAGT CTTCCACGAC
AGGCTGCTTG AAAATGGCGC CTTGCCCTTA GATTTATTGG AGCAAAAGAT GGATCTGTGG
CTCGAATCCG CTAAGGCGGC CAATGCCGCC GCCGAGACCA AGGTGTAA
 
Protein sequence
MSNPMKRIIN ALMLAMLATG CSDPNPTQTN QTAEQAKAEK AVQVLSLKQQ LAPITQRYFA 
LRPEIATYYG VAEDEAGKDV LSKLTDYSPS GENHRRKALK AILTELNAID ASQLSASEQV
SLGSIKSEIA GALLPAETVA YGTMLGEYGV WFLPYVVNHL SGLHVEFPGY MEDKFAVTTP
EQAKAYLNRL TMYPAAMGTV IDKLDQDVQM GVIPPDFIID KTIAVLQQQL VHHANEHPLV
SSFKAKLTAA QVPESEALVN SAAELVETKY YPATRQLISA LQAVRLKATH VAGLGHQPQG
AKLYKAMIKH LANSEMTPDE IHQLGLDEVA RITTEMDVLL KQVGYRKGTV GERMQRLLKD
PKYIYPNTAE GKQQLMTDIH GYLTKVNAKL PLWFGLLPNQ EVAVEAVPDS RAAATSGAFY
DAPSQDGSRK GTFWISLYDM AALPSYSLQT LTYHETNPGH HLQTLIGLSD TLPLLSTIFY
SNAAGEGWAL YAERLAAEMG MYQDNPINDL GRLQSELHRA VRLVVDTGMH AKDWSREKAI
DYAVATEGIH LSEATGEIER YVVWPGQALG YKLGELKIIE LRTKAKKALG DKFDIKVFHD
RLLENGALPL DLLEQKMDLW LESAKAANAA AETKV