Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0095 |
Symbol | |
ID | 4478031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 105371 |
End bp | 107278 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639724615 |
Product | hypothetical protein |
Protein accession | YP_867746 |
Protein GI | 117918554 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACC CGATGAAAAG AATAATAAAT GCTTTAATGC TGGCCATGTT AGCAACGGGC TGTAGCGATC CAAACCCAAC ACAGACCAAT CAAACCGCTG AGCAGGCCAA GGCCGAAAAG GCCGTCCAAG TATTGAGCCT TAAGCAACAA CTCGCGCCAA TCACCCAGCG TTATTTTGCC CTTAGACCCG AAATCGCCAC CTATTATGGC GTGGCCGAGG ATGAAGCAGG CAAGGATGTA CTCTCTAAGC TGACCGATTA CAGCCCATCG GGGGAAAATC ATCGCCGTAA AGCGCTTAAG GCCATATTAA CTGAACTCAA TGCTATCGAT GCCAGCCAGC TTAGCGCCTC GGAGCAAGTG AGTTTAGGCT CGATAAAATC TGAAATCGCT GGCGCCCTGC TGCCAGCCGA AACCGTGGCC TATGGCACTA TGCTCGGTGA ATACGGTGTT TGGTTTTTAC CATATGTTGT CAACCACTTA TCTGGATTGC ATGTTGAATT TCCGGGGTAT ATGGAAGATA AGTTTGCGGT CACCACCCCT GAGCAAGCTA AGGCCTATCT CAACCGCTTA ACCATGTATC CTGCCGCCAT GGGCACAGTT ATCGATAAGC TAGATCAAGA CGTGCAAATG GGCGTGATCC CACCCGATTT TATTATCGAT AAGACTATAG CCGTGTTGCA GCAACAATTA GTGCACCATG CTAATGAACA TCCCTTGGTC AGCAGTTTTA AAGCCAAATT AACCGCCGCC CAAGTACCAG AAAGTGAGGC GTTGGTGAAC TCAGCCGCCG AACTGGTGGA GACCAAATAT TACCCTGCGA CGCGCCAGTT GATTTCCGCA CTGCAAGCCG TGCGCCTCAA GGCCACCCAT GTGGCGGGAC TCGGACACCA ACCTCAAGGC GCTAAACTCT ACAAGGCGAT GATTAAGCAC CTCGCCAATT CGGAGATGAC CCCAGATGAG ATCCACCAAC TTGGATTAGA CGAAGTTGCC CGCATTACCA CCGAGATGGA TGTGTTACTC AAACAAGTGG GTTACCGCAA AGGCACAGTT GGCGAGCGCA TGCAGCGATT GCTTAAGGAT CCTAAATACA TCTACCCCAA CACCGCCGAG GGTAAACAGC AATTAATGAC GGATATTCAC GGCTATCTGA CGAAAGTGAA CGCCAAATTA CCGTTGTGGT TTGGGCTGTT ACCGAATCAA GAGGTTGCGG TTGAAGCCGT GCCAGACAGT CGCGCCGCCG CAACCAGCGG TGCATTTTAC GATGCGCCTT CTCAAGATGG TTCGCGTAAG GGCACCTTCT GGATAAGCCT GTACGATATG GCGGCGCTGC CCTCCTATTC GCTGCAAACC TTAACCTACC ACGAGACCAA TCCCGGCCAT CATCTACAGA CGCTCATCGG TCTGTCGGAT ACCTTGCCGC TGCTGAGTAC CATTTTTTAC TCTAATGCCG CGGGAGAAGG TTGGGCGCTG TATGCAGAGC GCTTAGCCGC CGAGATGGGC ATGTATCAGG ATAATCCGAT TAATGACCTT GGCCGCTTGC AGTCTGAGTT ACACCGCGCG GTGCGCTTAG TGGTCGATAC GGGTATGCAT GCCAAGGATT GGAGCCGTGA GAAAGCCATT GATTATGCAG TGGCGACTGA GGGAATACAC CTATCTGAAG CCACGGGCGA AATCGAGCGC TATGTGGTTT GGCCGGGGCA AGCCTTAGGT TACAAGCTGG GCGAGCTGAA AATTATCGAA TTGCGCACTA AGGCCAAAAA AGCCTTGGGC GATAAGTTTG ATATTAAAGT CTTCCACGAC AGGCTGCTTG AAAATGGCGC CTTGCCCTTA GATTTATTGG AGCAAAAGAT GGATCTGTGG CTCGAATCCG CTAAGGCGGC CAATGCCGCC GCCGAGACCA AGGTGTAA
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Protein sequence | MSNPMKRIIN ALMLAMLATG CSDPNPTQTN QTAEQAKAEK AVQVLSLKQQ LAPITQRYFA LRPEIATYYG VAEDEAGKDV LSKLTDYSPS GENHRRKALK AILTELNAID ASQLSASEQV SLGSIKSEIA GALLPAETVA YGTMLGEYGV WFLPYVVNHL SGLHVEFPGY MEDKFAVTTP EQAKAYLNRL TMYPAAMGTV IDKLDQDVQM GVIPPDFIID KTIAVLQQQL VHHANEHPLV SSFKAKLTAA QVPESEALVN SAAELVETKY YPATRQLISA LQAVRLKATH VAGLGHQPQG AKLYKAMIKH LANSEMTPDE IHQLGLDEVA RITTEMDVLL KQVGYRKGTV GERMQRLLKD PKYIYPNTAE GKQQLMTDIH GYLTKVNAKL PLWFGLLPNQ EVAVEAVPDS RAAATSGAFY DAPSQDGSRK GTFWISLYDM AALPSYSLQT LTYHETNPGH HLQTLIGLSD TLPLLSTIFY SNAAGEGWAL YAERLAAEMG MYQDNPINDL GRLQSELHRA VRLVVDTGMH AKDWSREKAI DYAVATEGIH LSEATGEIER YVVWPGQALG YKLGELKIIE LRTKAKKALG DKFDIKVFHD RLLENGALPL DLLEQKMDLW LESAKAANAA AETKV
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