Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0089 |
Symbol | |
ID | 4478025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 100534 |
End bp | 101214 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724609 |
Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
Protein accession | YP_867740 |
Protein GI | 117918548 |
COG category | [C] Energy production and conversion |
COG ID | [COG4229] Predicted enolase-phosphatase |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E [TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATCA GAGCCATAGT CGTAGACACA GCAGGCACCA CGACAGACCT AACCTTTATC CAAGATGTGC TATTCCCCTA TTCTGTCAAA GCCTTACCAG ACTTTTTAGC GCAGAACCAA CACAATGTCT TGGTGGAAAA CTGTATCTGC GACACCCGAG ATATCGCCCT CGAACCCGAT GCCAATTTAG CCCGCGTGAC TGAAATTTTG CAGCAATGGG TACATGAAGA CCGCAAAGCG ACCCCACTCA AGACCCTACA GGGTTTGATT TGGAAGCAAG GTTACGCCCA TGGCGAATTT ACAGGCCATA TCTTCCCCGA CTTTATCGAA GCGGTTAACC GTTTTAGCGC GCAAAAACTG CGTATTTACA GCTTCTCTTC GGGTTCAGTT GAAGCCCAAA AACTGCTGTT CAGCCACAGT GATGGCGGCG ATTTAACCGA AATGTTTAGC GGCCATTTTG ATACCCGTAC CGGTAACAAA TTAGATAAAC AAGCCTACGC TAACATACTC AACACCATCA GCTTAAGCCC TAAGCAAGTG CTGTTTGTGT CCGACGTGGT TGAAGAGCTT AAAGCCGCCG AAGCCGCAGG CATGATGACC TGCCAAATGG TGCGCGACAG CAAACAACGC ACCGGCGATT ATCGCACTAT TAACAGTTTC GATGAGCTAG TGATCGACTA A
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Protein sequence | MGIRAIVVDT AGTTTDLTFI QDVLFPYSVK ALPDFLAQNQ HNVLVENCIC DTRDIALEPD ANLARVTEIL QQWVHEDRKA TPLKTLQGLI WKQGYAHGEF TGHIFPDFIE AVNRFSAQKL RIYSFSSGSV EAQKLLFSHS DGGDLTEMFS GHFDTRTGNK LDKQAYANIL NTISLSPKQV LFVSDVVEEL KAAEAAGMMT CQMVRDSKQR TGDYRTINSF DELVID
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