Gene Shewana3_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0088 
Symbol 
ID4478024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp100076 
End bp100471 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content49% 
IMG OID639724608 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_867739 
Protein GI117918547 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAAAC AAGTTGGCAA TACTCATATC CAAGCAAAGC ATCTCGCCAG TTGCCACTGT 
GGCGCCGTGG TGTTGGAGTT ATCGCTGCCC AATGGCATTG AAAAGCCAAG GCGCTGTGAT
TGCTCTATCT GTCGGCGCAA GGGGGCTATT GTCGGCTCAG TGCCGCTAGA GGGATTGAAG
ATTATCAAAG GCGAGACCGT ATTAAAGTGC TACGAATTTA ATACCAAAAC GGCCAAACAT
TACTTCTGCT CCGTGTGCGG CATTTATACC CATCATCAAA GGCGCTCTAA TCCCAATGAA
TATGGCTATA ACCTTGGTTG CCTCGAAGGC GTTAATCCCT ATGAATTAGG CGATGTGCCG
GTTTGCGATG GGGTGAATCA CCCGGCGGAC AGGTAG
 
Protein sequence
MIKQVGNTHI QAKHLASCHC GAVVLELSLP NGIEKPRRCD CSICRRKGAI VGSVPLEGLK 
IIKGETVLKC YEFNTKTAKH YFCSVCGIYT HHQRRSNPNE YGYNLGCLEG VNPYELGDVP
VCDGVNHPAD R