| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0080 |
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| Symbol | |
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| ID | 4478016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 92480 |
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| End bp | 94273 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639724600 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_867731 |
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| Protein GI | 117918539 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0335816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG AACAATATCA CGTAATTCGA CTATTACAGC AGCAAAGCCA GTCATTAAAA
GAGGCTATAG CGCTGGAAGG TTTTGAAATG GCTGCGCCTT GGCATCAAGT CAGTTGGCAG
GCATTCGATC AAATCAGCCA TAAAATTGCA CAGGTGTTGA TTGAACTTGG CGTACAAGTG
CAAGACCGTT GCGTGATCCT GTCGCAAAAC TGCCCTCAAT GGACCTGTGC CGACATAGGT
ACCCTGAAAA GCCGTGCCGT TGTGGTCCCC ATTTACCCGA CCAGTACCTT AGAGCAAGCC
AGCTTTATCA TTAACGATGC GGCGGCCAAG GTGATTTTTG TTGACGACGC TAAGCAATAT
GCGCTGGCCT GTGAGCTGCA AAAACAGTGT CCGACCCTAG AGCATGTGAT TGTGTTCGAT
GCGAGTGTTG AGCTGGCGCA GGACAAGGCT CAACATCAGC ATTTAGACAG CTTGTTAGCC
AAAGAATATG GCCAGAGTGC TGAGCTTGAG CAGCGCTTAA AGGATGCCAA TCTCGACGAC
CTGTTAACCT TGATTTATAC CTCTGGTACC ACGGGCGACC CTAAGGGCGT GATGCTGGAT
TACCGCAATA TGGCTTCGAC TGTGCGTCAG CACGATCAGA TCCTGCCGTT TACTACTGGC
GATGTGTCGT TAGCTTTCCT ACCGCTAAGC CATGTGTTTG AGCGTGGTTG GAGCTTCTAC
GTGCTGTGCC GTGGCGGCCA CAACGTGTAT CTGCAAAACA CCCAAAGAGT GAAAGAGGCC
ATCAGCGCAG TGCGTCCGCA TACCCTGTGC GTGGTACCGC GTTTCCTCGA GAAGGTTTAC
AGCGCAGTGC AGGATAAGGT CGCTAAATCC GCCGAAGGCC GTAAAAAACT GTTTGCTTGG
GCCATGGGCG TCGGCGAACG CCAGTTTGAG GTGAGCCAAG GCCGCGCTAA GGGCGGTTTA
TGGTTATCCT TGCAATGGCG TTTAGCGCAC AAGCTGGTTT ACAGCAAGTT GCAAGCCGTG
CTCGGTGGGC GCTTAAAGTT TATGCCCTGC GGTGGCGCCG CTCTCGATTT AAACGTAGCG
TCTTTCTTCC ATGCCATTGG TATTCCGGTA CTTTGTGGTT ACGGCATGAC GGAAACGAAC
GCCACTGTGA CCTGTAATAC CCTAGATAAC CGAGTTGCGG GTTCGAACGG TAAAGTCTTA
CCCGAAATCG AAGTGAAGCT AGGTAAGGAC GATGAGATTT TAGTCCGTGG CGACACTGTG
ATGCGCGGTT ATTACAATCG CCCCGAAGAT ACCGCAGCTG CCTTCGAAGA TGGCTGGTTA
AAGACCGGCG ATGCGGGACG ACTCGATGCC AATGGCAATT TATTTATTAC CGACCGCATC
AAAGAGTTAA TGAAAACCTC CAACGGTAAA TACATTGCTC CGCAACGGGT TGAAGGCACA
GTGGGCCGTT GCCCCTTTAT CGAACAAGTG GCTGTGATTG CCGATGCCCG TAACTATGTG
ACGGCGCTGA TTGTGCCAGC CTTTGAATCC CTCGAAGCCT GGGCCAAGGA TAAGGGCTTG
AAATACGAGT CGCCTATCGA GCTGCTGCGT CACAGCCATG TGGTTGAACA TTTCGAGCAG
CGCTTAAAGC ATTTACAGCA AGAGTTGGCG GGTTTTGAGC AAATCAAAAA GTTTACCCTG
CTGCCTGAAG CCTTTTCGAT GGAGGCGGGA TTAATCACCC CGACGCTGAA ATTGCGCCGC
AAAATGATTT ACCACAAGTA CGCCCATGAA ATTAATGCTA TGTACAATAA TTGA
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| Protein sequence | MSLEQYHVIR LLQQQSQSLK EAIALEGFEM AAPWHQVSWQ AFDQISHKIA QVLIELGVQV
QDRCVILSQN CPQWTCADIG TLKSRAVVVP IYPTSTLEQA SFIINDAAAK VIFVDDAKQY
ALACELQKQC PTLEHVIVFD ASVELAQDKA QHQHLDSLLA KEYGQSAELE QRLKDANLDD
LLTLIYTSGT TGDPKGVMLD YRNMASTVRQ HDQILPFTTG DVSLAFLPLS HVFERGWSFY
VLCRGGHNVY LQNTQRVKEA ISAVRPHTLC VVPRFLEKVY SAVQDKVAKS AEGRKKLFAW
AMGVGERQFE VSQGRAKGGL WLSLQWRLAH KLVYSKLQAV LGGRLKFMPC GGAALDLNVA
SFFHAIGIPV LCGYGMTETN ATVTCNTLDN RVAGSNGKVL PEIEVKLGKD DEILVRGDTV
MRGYYNRPED TAAAFEDGWL KTGDAGRLDA NGNLFITDRI KELMKTSNGK YIAPQRVEGT
VGRCPFIEQV AVIADARNYV TALIVPAFES LEAWAKDKGL KYESPIELLR HSHVVEHFEQ
RLKHLQQELA GFEQIKKFTL LPEAFSMEAG LITPTLKLRR KMIYHKYAHE INAMYNN
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