Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0078 |
Symbol | |
ID | 4478014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 90181 |
End bp | 91044 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639724598 |
Product | ABC transporter related |
Protein accession | YP_867729 |
Protein GI | 117918537 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000932983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCAAG ACTGTACCCC AATACTAGAG TTTTCTAACG TAAACAAAGT GTTTCGTGGC AAAGGCGCCA GCGAAAAACG TGCGCTCAAG GATCTGACCT TACGTTTATC GGCCGGTATG GTGGTCGGTC TATTGGGACA AAACGGTGCG GGTAAATCGA CCCTAATGCG CTGCGCCTTG GGGATCCTCT CGCCGGATTC GGGCGAAATC CGCACCTTAG GCGAAACGCC GGAGCAGCTT TCTTCTGCTG CTAAGGAACG CTTAGGCTAT GTGCCGCAGC AACCCTTTGG TTATGAAGGC TTTACCGTTG AACGTGCCCT CGATTTGCAC CGCAGTTTTT ATCCCCACTG GGACATGCAG TTAGAGCAGG ATTGGCTCAC CCGCTTCGAA TTAGATGTGA CTCAACAGGT ACAGCGCCTG TCCGTTGGTC AGCGTCAATC CCTGGCCTTG ATCATGGCGA TGGCCTATCG CCCCGAGTTG CTGATCCTCG ACGAACCCGT GGCCAGCCTC GACCCGATAG TCAGACGCAA GTTTATGGTC GATTTGTTCG ACTTAGCCCT CGAATCCGGC TCGGCCGTGT TGTTTTCATC CCATATCACC TCAGATTTAG AACGGGTCGC GAGCCATGTC GCCCTGATTA AACAGGGCGA GTTAGTGCTG TTTAAGGAGA TTGATGCCCT ACGGGAAGAG GTGCGTTTAG TCAAACTCGC GGAGGGCGCC GAGTTACCTG AGCAGGTGCG TATCCTCAGC CGCGATGGCG ATTCTGTTCT GGTGGATAGG GGCGATGTGG AGCTTAATTT GCCCGGCGTG CAGCGCAGCG AAGCGCTGAA TTTGGAACAA CTCTTTGTGG AGCTGCACAA ATGA
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Protein sequence | MDQDCTPILE FSNVNKVFRG KGASEKRALK DLTLRLSAGM VVGLLGQNGA GKSTLMRCAL GILSPDSGEI RTLGETPEQL SSAAKERLGY VPQQPFGYEG FTVERALDLH RSFYPHWDMQ LEQDWLTRFE LDVTQQVQRL SVGQRQSLAL IMAMAYRPEL LILDEPVASL DPIVRRKFMV DLFDLALESG SAVLFSSHIT SDLERVASHV ALIKQGELVL FKEIDALREE VRLVKLAEGA ELPEQVRILS RDGDSVLVDR GDVELNLPGV QRSEALNLEQ LFVELHK
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