| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0076 |
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| Symbol | |
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| ID | 4478012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 88057 |
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| End bp | 89676 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724596 |
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| Product | TAP domain-containing protein |
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| Protein accession | YP_867727 |
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| Protein GI | 117918535 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000458817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGATA GCATGATCCA CAGGAAGTCC CATAATGCCA GCGCTGACGT GGCAATGAAG
CGCGTTGATA CTCGCCAGCA CTCGGGCAAG TTAAGCAAAA GCATCATCAG TTTGAGTGCG
CTGATGCTCG CCATGGGTAG CGCCACGGCT TGGGCGAGCG ACAACTCAGT AAAGCCCACT
GAATCCGCCA ACACCTGTTA TGTGGAGGGC GTGTCGGACC GCTTAAATTG CGGCTTTGTC
ACTGTGCCCG AAAACCCTAA TAAGCCCGAT GGCAAACAGA TCCAAGTGCA TTATGTGGTC
TTGCCCGCGG TGAAAAACGT CAACCACGAA GAGGCTTTAC TGGCGATCGC CGGCGGCCCA
GGTCAATCGG CCATAGATAA CGCGGCAGGC TTCGATAGCA TGCTGAACAA AGTGCGCCAG
CAGCGCGATA TTCTGCTAAT CGATCAACGC GGAACGGGGC GCTCCAATGT GCTCAATTGT
GACGCAGGCC CACAATCGCC ACTGTCCTTC GACGATGATA ATGTCGATAC CTTGGCCGAA
GCGCAAAAAT GCCGCGATCA ATTCCCCGAT ACTGATGTCA CCCAATATGG CAGCCTCAAT
GCGGTGCAAG ACTTCGAAGC CGTACGCGCC CAGTTAGGCT ACAAAAAACT GCACCTCTAC
GGTATCTCCT ACGGCACACG TATGGCACAG CTCTATATGC GCTTATATCC CGAGCACTTA
GCCACAGTCA CCATAGACGG TATTGTGCCC ATGCAGCAGA GCGTATTGGA GATTGGCTCG
GCGATTGAAC GTGGCTTTGA CTTGCTGTTT AAAGACTGCC AAGACACAGC CGCCTGCCAT
GCCGAGTTTC CTGAGCTCAA GGCCGAGTTT GACCAAGTAG TCGCTAAACT CAGCCAAGGG
CCAGTGATGG AGCAAGTGCA CGACCCAGTG ACGGGAGAAA AGACCCTACT CACTATGACG
CGCTCAAAGT TTTACGGCGC GATCCGCATG GCGCTGTATC AAACCAATGT ACGCGCCTTA
GTGCCCCATG CGATTCATCA GGCCGCTAAG GGTAACTACC AACCATTACT CGGGTTATTT
GCCTTAACTA CGGATAATGC GGGTATGGCA ATGGGCATGC ACGCCTCAGT CGTCTGCGGT
GAAGACATAC ATCGCATCAC CCCTGCGATG CGCGAACAGG CCAAAACCTC CTATGTTGGC
AAAACCATGC TCGAAAGCTT AGAAGCATCG TGCTCTGTGT GGAAGGTGCC GCCAGTCGAT
GCCAACTTTA GCGAGCCTAT CAAGAGTGAT ATCCCCACCC TGTTGCTATC GGGCGAAATT
GACCCAGCAA CCCCACCGAG CTGGGGAGAA CTGGCGATGG AGAAACTCAC CAACGCCAAA
CACTTTGTCG CACCTTATGC GACCCATGGT GTAGCCTATC AGTCCTGCGC CAATAACTTA
GTCGCCGAGT TAGTGCGTAC TGGTTCGGTC AATGATCTCG ATGGTGAATG TTTGAAGAAG
GATGTGCGCC GTAGCTTCTA TTTAAACGCC AGCTCGGTTG AGCCACTCGC AACCGAAGAT
GCAACCCACT CTTCCAAAGA TAAGCCCAAG GATAAGCCCA GCACTGGAGC CAAGGAGTAA
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| Protein sequence | MIDSMIHRKS HNASADVAMK RVDTRQHSGK LSKSIISLSA LMLAMGSATA WASDNSVKPT
ESANTCYVEG VSDRLNCGFV TVPENPNKPD GKQIQVHYVV LPAVKNVNHE EALLAIAGGP
GQSAIDNAAG FDSMLNKVRQ QRDILLIDQR GTGRSNVLNC DAGPQSPLSF DDDNVDTLAE
AQKCRDQFPD TDVTQYGSLN AVQDFEAVRA QLGYKKLHLY GISYGTRMAQ LYMRLYPEHL
ATVTIDGIVP MQQSVLEIGS AIERGFDLLF KDCQDTAACH AEFPELKAEF DQVVAKLSQG
PVMEQVHDPV TGEKTLLTMT RSKFYGAIRM ALYQTNVRAL VPHAIHQAAK GNYQPLLGLF
ALTTDNAGMA MGMHASVVCG EDIHRITPAM REQAKTSYVG KTMLESLEAS CSVWKVPPVD
ANFSEPIKSD IPTLLLSGEI DPATPPSWGE LAMEKLTNAK HFVAPYATHG VAYQSCANNL
VAELVRTGSV NDLDGECLKK DVRRSFYLNA SSVEPLATED ATHSSKDKPK DKPSTGAKE
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