Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0065 |
Symbol | |
ID | 4478001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 75834 |
End bp | 76862 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724585 |
Product | LacI family transcription regulator |
Protein accession | YP_867716 |
Protein GI | 117918524 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000194735 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAACTA AAAACTGGAC TTTAAAGAGC ATAGCTAACG AGCTAGGTGT CTCTAACGCC ACTGTTTCTA ATGCTTTTAA TCGTCCCGAT CAGCTATCGG AAAAACGTCG CAACGAGATT TTAGCCGCCT GCTCTAAACT GGGGTATTTT GGCCCAAACA AGGCGGCGCA GTCCCTACGT AGGGGCAAAT TTGATACCGT CGCGCTGGTA CTGTCCGATA GTGTTGAATA TATGGTGTCC GATCCTGTCG CCAGTAAGTT TATGAAGGGG GTGGCTTCGG TATTGGAGCG GGAAAAACTC AACTTACTGC TATTTTCTGG CAGCTCCGAC AGTGTGAATG CGGTGGCCGA TTTTGTGGAT GGGTTTATTT GTTATGGTCG CCCGCGCAAT GCCTTGCTCG CCGAGCAATT AAAACAGGTT AAGAAGAAGG TGGTTACAGT GGACTTTGAT ATCCACCGCA ACGCTTCTGT CAGCATTGAC AATAAGTTAG CCGCCTATGA GGTGGCAAAA TTGGCGTTAA AATCTCCCTC CGATCAAGTT GCAATATTGG GATTGAGGCT ACTCGATACC CATTTAACTT GCCGAGTTTA CGATTTGAAT TTGCTCGAAA TCGATATGTC GATTGCGCAC CAGAGGTTGC AGGGATATTT ACAGGCGATT GAGGAAACGG GTGTCACCCT TGGTAATGAT CGGATTTGGA ATATTCCAGA AAGTAATGCG GAGTATGCGC GGATTGCGGC CAAGGAGGCA TTAAACTCAA CCCCAAGACC CAATGTATTT TTATGTATGA GCGACTTAAT TGCCCTCAGC GTGCTGGGTG AGGCGCAGGC CATGGGATTA GCGATTCCGG AGGATATTCG TGTCGTGGGA TTTGATGGTA TTGATGAGGC GACTCGCTCA ACTCCACCAC TGACCACGGT TTACCAATAC TCGGAACAAA AAGGCCAAAT GGCAGCGCAG ATGTTTATCG ACGATGCCGT GCATGCTCAG GTATTAGGGT ATGAACTACG TTTAGGCAAA AGCTGTTAA
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Protein sequence | MTTKNWTLKS IANELGVSNA TVSNAFNRPD QLSEKRRNEI LAACSKLGYF GPNKAAQSLR RGKFDTVALV LSDSVEYMVS DPVASKFMKG VASVLEREKL NLLLFSGSSD SVNAVADFVD GFICYGRPRN ALLAEQLKQV KKKVVTVDFD IHRNASVSID NKLAAYEVAK LALKSPSDQV AILGLRLLDT HLTCRVYDLN LLEIDMSIAH QRLQGYLQAI EETGVTLGND RIWNIPESNA EYARIAAKEA LNSTPRPNVF LCMSDLIALS VLGEAQAMGL AIPEDIRVVG FDGIDEATRS TPPLTTVYQY SEQKGQMAAQ MFIDDAVHAQ VLGYELRLGK SC
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