Gene Shewana3_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0058 
Symbol 
ID4477994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp69187 
End bp69885 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID639724578 
ProductTrkA domain-containing protein 
Protein accessionYP_867709 
Protein GI117918517 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.70567e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACATT TTACTGTCAT CGGATTAGGC CGCTTCGGCG TTGCCGCGAG CCTCGAACTC 
ATCCACTTAG GCCACACGGT TACCGGTGTC GATAGCGACC CAAAAATCGT TGAAAAATAT
GTAGAAAGTC TTACAGAAGC GGTGATTTGC GACTGCGCCG ATGAGGCGTC GCTGCGCGAA
CTCGATCTGA CCAACTGCGA GGCCGTGCTG GTCGCTATCG GTGAGGATAT GCAGTCTAGC
CTGCTGTGCA CGCTGGCACT GAAAAACCTC GGCGTGCAGA CGATTTGGGT CAAGGCCAGC
ACCAAGGCGC ACCATACCAT AGTGTCGAAA CTCGGCGTTG CCCGTATTAT TCATCCCGAG
GAAGAAATGG GGATCCGCGT CGCCCAGTCG CTTAACTACC CTATGGTGAA TAACTTTCTC
GCCATCGGCG ATGGGCTTTA TATTGTTGAA ATCCATATTA AAGCCCAGTT ACATCACACC
ACTGTTGGCC AACTGCTCGG GAGCTTGCAG GAGCACAGCG CCGATGAGCA AACCAATGTC
CCACGCAATC CTAAGGGCAA GGTAGCGGCG CTGATGGTTA AGCGTGAGCA CAACGTATTT
AGCAAGATTG ATAGCGACTT TAGCCTGCAC ACAGAGGATG CCCTATTCCT CTGCGGTAGC
CGTGCCGAGT TAAAACAGCT CGCACCAAGG TTGGTGTAA
 
Protein sequence
MAHFTVIGLG RFGVAASLEL IHLGHTVTGV DSDPKIVEKY VESLTEAVIC DCADEASLRE 
LDLTNCEAVL VAIGEDMQSS LLCTLALKNL GVQTIWVKAS TKAHHTIVSK LGVARIIHPE
EEMGIRVAQS LNYPMVNNFL AIGDGLYIVE IHIKAQLHHT TVGQLLGSLQ EHSADEQTNV
PRNPKGKVAA LMVKREHNVF SKIDSDFSLH TEDALFLCGS RAELKQLAPR LV