Gene Shewana3_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0056 
Symbol 
ID4477992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp66383 
End bp67246 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content40% 
IMG OID639724576 
Producthypothetical protein 
Protein accessionYP_867707 
Protein GI117918515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000186467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAATT CTCTTTATCA TTATACTGAC ATCAACGCTG TGCGAGGGCT ACTAGAGCAC 
AAAAAGCTAT GGCTAACTGG TCATGAATTT TTGAATGATG AGCATGAGTT TATCGACGGC
TATCATATGC TCCAACAGGA TATCGAACAA CACCTCGTAA ACATCAACGC AAATAGCACC
CAAAGAGCAC AAGTTGGCGT TATTCTTCAG TATCTCAATG ACACATTAGC CCTATCCTGT
TCATTTTCTA AATCGCCTGA CATGCTATCG CAATGGCGTA GCTACTGCCC ACAAGAAGGT
GGTTACTGCA TAGAATTTGA CGATGACATA CTCAGAAGTT CTGTCATTAA CCCTGGTATT
CAGCCTGTTA GAACCTTCGA AGAATGTATT TATGATCAGA GTGAAAAAGC TCGTCAATCT
CAATTGCATG CCGAACATTG CATTAACGGA TTATTCCAAA ATCACTCGCC GAACGCCGAC
CGAATTTATC AAACGTATCT GAGTTTCCTA CATTTTTGTC TTAGATGTAA AAACGAACAC
TTCCTCGAAG AACAAGAAGT AAGGCTATGC ACATATTCAA ACAGCAATAG ACATAATACC
AATATAGTGC AGGTTGGTTC AGGTGGAACT ACTCTGACGA CACCAATTTT TGTTAATGAT
CCACTCAGTT TTCGTACTAG CAAAAATCTA TTGATTCCTT ACTTAGAGTT ACCTTTTGAC
ATAAGAGCAA TCAAATCGAT CACAATTGGC CCTAACAAGA ATATGGACAC AGCTCTTCAA
GGTTTGGAGC TTTACCTTAG AGAGCAAAGG CTCGCAGGGC AGATTATTGT TAACAAGTCA
AAAATACCTT ACCGTAATTG GTGA
 
Protein sequence
MPNSLYHYTD INAVRGLLEH KKLWLTGHEF LNDEHEFIDG YHMLQQDIEQ HLVNINANST 
QRAQVGVILQ YLNDTLALSC SFSKSPDMLS QWRSYCPQEG GYCIEFDDDI LRSSVINPGI
QPVRTFEECI YDQSEKARQS QLHAEHCING LFQNHSPNAD RIYQTYLSFL HFCLRCKNEH
FLEEQEVRLC TYSNSNRHNT NIVQVGSGGT TLTTPIFVND PLSFRTSKNL LIPYLELPFD
IRAIKSITIG PNKNMDTALQ GLELYLREQR LAGQIIVNKS KIPYRNW