Gene Shewana3_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0052 
Symbol 
ID4477988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp61994 
End bp62470 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content42% 
IMG OID639724572 
Productrhodanese domain-containing protein 
Protein accessionYP_867703 
Protein GI117918511 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000103873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCCTTAT CGAATTTTTC GCCATTTATA CGGGCTGTAA CCATGCAAGA ATATATCGAA 
TTTTTTAAGG CTCACACTAT GCTAAGTCTG GCTTGGGTGG GTTTGTTTGT AATGCTTGTG
GTCAGTGTGA TCAAATCGAG CTTCTCTAAA ATCAAAAATG TCACTCATCA AGAACTCACC
ACTATGGTGA ACAGACAAGA CGCTAAAGTC GTGGATGTGC GTTCAAATGA CGAGTTCCGT
AAGGGCCATA TTGTTGATGC AGTTAACGTT ACGCTCGCGG ATATCAAAAA TAATCAGGTT
TCAGCCCTTG AAAAGTTCAA AGGCAGTCCC ATTATACTGG TATGCAATGC TGGCATGACC
TCGTCTCAAG CGGCTCAGCT TTTAAGTAAA CAAGGTTTTG AAAACCTGTA TAACTTGAAA
GGTGGTATGG GTGAATGGCA GGCAGCAAAT ATGCCTGTTT CAAAAAGCAA AAGATAA
 
Protein sequence
MPLSNFSPFI RAVTMQEYIE FFKAHTMLSL AWVGLFVMLV VSVIKSSFSK IKNVTHQELT 
TMVNRQDAKV VDVRSNDEFR KGHIVDAVNV TLADIKNNQV SALEKFKGSP IILVCNAGMT
SSQAAQLLSK QGFENLYNLK GGMGEWQAAN MPVSKSKR