Gene Shewana3_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0050 
Symbol 
ID4477986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp59082 
End bp60215 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content49% 
IMG OID639724570 
Productpeptidase M23B 
Protein accessionYP_867701 
Protein GI117918509 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000146051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCACTC GACTCCCCGT TAAAGCCAGC ATTATTGCTG GCTTTATGAT GTTATCTTTC 
TCGGTCTACG CTTCTGATTT GGAGAAGCGT CAGTCCGAGT TGAAATCCAT CCAAGCGCAA
ATCAACCAAC AACAAAGCGC ACTCAAAAAC ACCAGTAAAC AGCGGGAAAA GTTACTCGCC
TTGCTGCGTA GTGACGAAGA GGCCATTGCG GCGGCAGCTA AAAAGGTCAA TAGCACCAAA
AACAGTTTGG CGCAGATTGA TACTAAGCTC GCTGAACTCA AACAACGCCA AGAAGAGTTA
GAAACCCTCA AGGTCAGCCA GCAAAAAACG CTCTCAAAAC AACTCTCGAG CGCCTATCTT
GCCGGTAACC ACGATTACAC TAAGATGATG CTGAATCAGC AGAGTCCCGC CACGATTGAA
CGGATGTTGG CATATTACCA ATACCTCAAC AAGGCACGCA TGAACTCGAT TAACGAGTTA
AAAAAGACCA TCACCGAACT AGATGAAATT AAAGTCTCGC AAACCAGCAA GCAAAAACAA
TTAACTAAGC TGATGGCCGA GCAACAAGTG CAATCTAAGC GCTTGAACCA AGAACAAGAT
CAACGCCAGC TCACCCTAAA AGAATTACAG CGCACCCTGA ATACCAAGGG CGCCGAACTC
GAACAACTGC AAATTGAAGA AGCCAGCTTA AAACGAGTGG TTGAGCAAGC GCTTAAGGCG
ATGCGTGATA ACCCCTCGAT GGAAGGCTTC GATAAACAAG GCGGCAAACT CAAGTGGCCG
ACCAAAGGCC GCGTCAGTGC CAGCTTTGGC AGCCCAAGAT CCGGCCAAGT GGTGTGGAAA
GGCACTATGC TCTCCGCACC CGAAGGGCAA AATATTCGCG CGGTTTCTGG CGGCAAAGTC
ATCTATGCCG ACTGGCTTAA AGGCTTTGGT ATGGTGATGG TGATAGACCA TGGTAAAGGT
TACATGAGCC TCTACGGCCA TGCGCAAGCC CTGTTAAAAA GCCCTGGGGA TATGGTCAAA
ACCGGTGAAG CTATTGCTTT AGTCGGACGT TCGGGTGGAC AGACAGAGCC TGGCCTATAC
TTTGAAATAA GGTATAAGGG GCAAGCGGTC GATCCAGCCA AGTACTGCCG TTAA
 
Protein sequence
MSTRLPVKAS IIAGFMMLSF SVYASDLEKR QSELKSIQAQ INQQQSALKN TSKQREKLLA 
LLRSDEEAIA AAAKKVNSTK NSLAQIDTKL AELKQRQEEL ETLKVSQQKT LSKQLSSAYL
AGNHDYTKMM LNQQSPATIE RMLAYYQYLN KARMNSINEL KKTITELDEI KVSQTSKQKQ
LTKLMAEQQV QSKRLNQEQD QRQLTLKELQ RTLNTKGAEL EQLQIEEASL KRVVEQALKA
MRDNPSMEGF DKQGGKLKWP TKGRVSASFG SPRSGQVVWK GTMLSAPEGQ NIRAVSGGKV
IYADWLKGFG MVMVIDHGKG YMSLYGHAQA LLKSPGDMVK TGEAIALVGR SGGQTEPGLY
FEIRYKGQAV DPAKYCR