Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0043 |
Symbol | aroE |
ID | 4478915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 48638 |
End bp | 49516 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724559 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_867694 |
Protein GI | 117918502 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000585691 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000012855 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGATA TGCCCTCAGT AACTACGCCA GCGCTTGATC GATATGCCGT GTTTGGCAAT CCGATAGGTC ACAGTAAATC GCCCTTTATT CATGGACAGT TTGCGTCTCT TACACAGCAG ACTTTGAGTT ATGAAGCGAT TCTGGCGCCC ATAGATGGTT TTGAAGCGAG TTTACGAGCA TTTTTTCAGG CGGGAGGAAA GGGCGCGAAT GTGACTGTGC CCTTTAAAGA GCAAGCCTTT GCCCTCTGCG ACAGCTTAAG TGCCGAAGCG ACATTGGCGG GTGCGGTCAA TACTCTAAGC TTGTTGGCCG ATGGCACTAT TTACGGTGAT AACACCGATG GTCTGGGGCT GGTGGCCGAT CTTGTTCGCC ATCTCGGCAG TTTGCAGCAT AAGCGGGTAC TCTTGGTGGG GGCCGGCGGT GCGGCGCGCG GCTGTATCTT GCCATTGCTC AAGGCTGAAG TCGGGCAATT GGTTATCACT AACCGAACCC AAAGTAAGGC ACAGGCCTTA GTGGATATTT TCAGCCAAGT ACAAGAAGGG CGCTACAGCG ATAAACTCCA GGCTGTATCG ATGTCAGAGT TGTCGGGGGT GTTCGATTTA GTGATTAACT CGACCTCAGC GAGTCTAGCG GGAGAGTTAC CGCCACTGTC ACAGTCCATC ATAGGCAACA AAACGGCTTG CTACGATATG ATGTATGGCG CCAAACCAAC AGCATTTAAT CAATGGGCTT TGCAACAGGG TGCAGCGCAA GTGATTGATG GACTGGGTAT GCTTGTCGGT CAAGCGGCGA AGAGTTTTGC ACTTTGGCGT GGCGTCGAGC CAGATACCTC AGGAGTGCTT AAATTGCTCA GGGACAAACT GCAGGTCGAC GCGCAATAG
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Protein sequence | MTDMPSVTTP ALDRYAVFGN PIGHSKSPFI HGQFASLTQQ TLSYEAILAP IDGFEASLRA FFQAGGKGAN VTVPFKEQAF ALCDSLSAEA TLAGAVNTLS LLADGTIYGD NTDGLGLVAD LVRHLGSLQH KRVLLVGAGG AARGCILPLL KAEVGQLVIT NRTQSKAQAL VDIFSQVQEG RYSDKLQAVS MSELSGVFDL VINSTSASLA GELPPLSQSI IGNKTACYDM MYGAKPTAFN QWALQQGAAQ VIDGLGMLVG QAAKSFALWR GVEPDTSGVL KLLRDKLQVD AQ
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