Gene Shewana3_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0042 
Symbol 
ID4478914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp48030 
End bp48467 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID639724558 
Productglobin 
Protein accessionYP_867693 
Protein GI117918501 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0182573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.60997e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTGGC TTAAAAAGAT TTTTAGTAAA CACACAAGTG CGCCGGATGA CAGGGATCCG 
AATCAGTCGA ATGCCTATGA TTTAATTGGT GGCGACAAAG TGATCCGTGC TATTGCCAAT
AGTTTTTATC AGAAAATGGC AAGCTCGGAA GAAACACGAG CCTTATTCGC GATTCACCGT
GCACCGATTG CGGAGTCGGA GCAGAAGCTC TATGAGTTTT TAAGTGGCTG GCTCGGCGGT
CCGCAGTTAT ATCAGCAAAA GTATGGTCAT CCCGCATTAC GCGCACGCCA TATGCCCTTC
GCTGTAGATG AGACGATGCG GGATCAATGG CTATTTTGCA TGAAGTTTGC CATTGAAAAG
CATATAAAAA AGCCAGAGCA TCGCGCCGCT ATCTATGAGG CGATTTCCAC TCTGGCCGAT
CATATGCGTA ATCAGTAA
 
Protein sequence
MNWLKKIFSK HTSAPDDRDP NQSNAYDLIG GDKVIRAIAN SFYQKMASSE ETRALFAIHR 
APIAESEQKL YEFLSGWLGG PQLYQQKYGH PALRARHMPF AVDETMRDQW LFCMKFAIEK
HIKKPEHRAA IYEAISTLAD HMRNQ