Gene Shewana3_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0038 
Symbol 
ID4478910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp45203 
End bp45679 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID639724554 
Producthypothetical protein 
Protein accessionYP_867689 
Protein GI117918497 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.272353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000478432 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTGATA TCCTCATGTA TCTATTTGAA AACTATGTTC ACAGTGAAGT TGAACTGTTA 
GTGGATGAAG ACGAGTTAAC CAAGGAACTC ACTCGTGCTG GTTTTCACCA GTCAGAGATT
TTGAAAGCCT TAACTTGGTT GGAGCGTCTG GCTGAGTTGC AGGAAAGCGA TAAGCCTTAC
CTGTGCAATC ATGATCAGCA TTCATTTCGG ATTTACACCA AAGAAGAAAT GGAAAAGCTG
GACGTGGAAT GCCGTGGATT CCTGCTATTT TTAGAGCAAG TGAAAGTGCT GAATGTCGAA
ACCCGTGAGA TGGTGATCGA CAGAGTCATG GAGCTCGATG AGCCTGCCTT GATCCTCGAA
GATCTTAAGT GGGTGATTCT GATGGTGCTC TTTAATGCGC CCGGCCATGA GTCCGCCTAT
GAGCAAATGG AAGATTTAAT TTTTGAGCAG CCTGAAGAAG GTCGGCTACA TTCTTAA
 
Protein sequence
MFDILMYLFE NYVHSEVELL VDEDELTKEL TRAGFHQSEI LKALTWLERL AELQESDKPY 
LCNHDQHSFR IYTKEEMEKL DVECRGFLLF LEQVKVLNVE TREMVIDRVM ELDEPALILE
DLKWVILMVL FNAPGHESAY EQMEDLIFEQ PEEGRLHS