| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0036 |
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| Symbol | |
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| ID | 4478908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 42976 |
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| End bp | 44100 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639724552 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_867687 |
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| Protein GI | 117918495 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000243599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCGCA CCATGAAACG GCTAATTTTA CTTGCGTTAA TGACATTTAA TTGCACGTTG
GTTTCCGCTG ATACTCTCAC GCTGAAAGCA GGGCATCCTG AGTCATATGT GGTAAAAAAG
GGCGATACCC TGTGGGATAT CTCGGCAACC TTTTTAAATG ACCCTTGGAA GTGGCCACGT
TTATGGGATG TTAACCCCCA AATTGCTAAC CCTCATTTAA TTTACCCCGG CGATCAGCTC
ACTTTAGTCT TTATCGATGG CCAACCCAGA TTAGTGCGCA ATGGCGCTAA CGAGGGAAAA
CCCCATATTC GCAAAACCCC TGAGGGGCGC GTGATTGCTA AGAGCAATGC GGTTCCTGCG
GTTGACTTAG CGTTAATCCA AAACTATCTG GTGCAAAACC GTGTGGTGGA TGCCGACTGG
TTTGCACAGC AACCTATGGT GCTCGCGGGT GAGAGCCCTT CACGTCACCA TGTGGTTGGC
GATGTGATTT ATATCGACAG CGAACTGCCC TTAAACCAAA AGCTGGGCAT GTATGAACGC
GGTCGTGACT TCTTCAATAA ACAAACGGGT GAAGCCTTAG GACAAGAAGC GATTCTGGCA
TCGACTGGCC AGGTTATCGA ATCTGGCAAA GTGTCTAAGG TAAAAATCCT CAGCAACTAC
CGTGAAACCA AGGCGGGTTT TAGGGCGTTG CCGATGGAAG ATGAAGCCTT AATGTCTGCC
TATTTTACGC CAAAACCTGC AGAGCTTAAG ACACCTGCGA CCGTACTGGC GATTGAATCG
AAAATGCGTG AGGCGGGTAA GCTAAATGTG GTGTACTTAG ATAAAGGCAC GCAGGATGGT
GTTGAGCCAG GTGAAGTGTT CTCCATTTAC CGCGATGGCG AAGAAATTGT GATCAATAAC
GATGGTCAAC CCGTACCTGC GGCCGAGCGC ACCGCCTATG ACAATGTGGT GGCATCACTG
TCGTCAGATC GCGCCATTAA GATGCCTGAT ATTTACCATG GAAAACTCTT AGTCTTTAAG
GTATTTGATA AAGCGAGCTT AGGTTTAGTT GTCTCGACGG AACGTTCTGT TCGGGTCGAC
GATAAATTAA TCGCGCCGGA CTCCTTAGCC TTTAGAGGTG AATAA
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| Protein sequence | MDRTMKRLIL LALMTFNCTL VSADTLTLKA GHPESYVVKK GDTLWDISAT FLNDPWKWPR
LWDVNPQIAN PHLIYPGDQL TLVFIDGQPR LVRNGANEGK PHIRKTPEGR VIAKSNAVPA
VDLALIQNYL VQNRVVDADW FAQQPMVLAG ESPSRHHVVG DVIYIDSELP LNQKLGMYER
GRDFFNKQTG EALGQEAILA STGQVIESGK VSKVKILSNY RETKAGFRAL PMEDEALMSA
YFTPKPAELK TPATVLAIES KMREAGKLNV VYLDKGTQDG VEPGEVFSIY RDGEEIVINN
DGQPVPAAER TAYDNVVASL SSDRAIKMPD IYHGKLLVFK VFDKASLGLV VSTERSVRVD
DKLIAPDSLA FRGE
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