Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0032 |
Symbol | trkA |
ID | 4479450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 38658 |
End bp | 40067 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639724548 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_867683 |
Protein GI | 117918491 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.21174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000689203 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTA TCATATTAGG TGCGGGTCAA GTCGGGGGAA CCTTGGCCGA AAATTTGGTG GGTGAAAATA ACGATATCAC CATAGTCGAT AGCGACAAAT CCAGATTACG CGCCCTGCAG GATAAATATG ACCTTCGCGT CGTGGCGGGC CACGGTGCCC ACCCCGATGT ACTCAAAGAA GCTGGCGCCG AAGATGCCGA CATGCTGATT GCTGTGACCA ACAGCGATGA ATGCAACATG GTCGCCTGCC AAATGGCCTA CAGCCTATTT GGTACACCGA CTAAAATCGC CCGTATTCGC TCCGAACCTT ATCTGGCGAT GCGTGATAAA TTATTTATCG ACAGTGAAAC CAAAAATAGT GAGGGGCGCC CTCGCGGTGG TTTTGTGATC GATGAACTTA TCGCACCTGA GCAGTTAGTG ACCGCTTACA TTCAACGTTT GGTTGAATAT CCAGGGGCAC TGCAAGTGCT CGAATTTGCC GAAGGCCGTT TAAGTTTGGT TGCAGTTCGT GCCTATTACG GCGGCCCTTT GGTCGGTAAT GCCTTGGCTG CGCTTCGCGA GCATATGCCA AATATTGATA CCCGGGTGGC GGCGATTTTC CGCCAAGGTC GCCCTATCAT GCCCCGTGGC ACAACGATTA TCGAAGCCGA TGACGAAGTG TTTTTCGTGG CCGACAGTCG CCATATCCGC GCGGTGATGA GTGAAATGCA AAAGCTGGAT AACTCCTACC GCAATATCAT GATTGCTGGC GGTGGTAACA TCGGCTTAGG CCTGGCTAAA CGCCTCGAAC GCACCCACTC AGTCAAGCTG ATTGAACATA AGTTTGAACG GGCCGAAACG CTCTCTGAAC AGCTTGAAAA CACTACAGTA TTTTGTGGTG ACGCCTCAGA TCAAGAGTTG CTGCTCGAAG AACATATCGA CCAAACTGAC GTGTTTATTG CCGTCACCAA CGACGATGAA GCCAACATCA TGTCCGCCCT GCTCGCTAAA CGCATGGGGG CGAAAAAGGT GATGGTGCTG ATCCAGCGTG AGGCCTATGT GGATATTGTG CAGGAAGCGA ATATCGATAT CGCGATTTCA CCCCAGCAGG CGACGATTTC AGCCTTACTG ACCCACATCC GCCAAGGCGA TATCTGTAAC GTGTATTCCT TACGCCGCGG CGCCGCCGAA GCGATTGAAG CCATTGCCCA TGGCGACTCC AGCACCTCTA AGGTCGTTGG CAAGGCGATT GGCGATATCA AGCTGCCGCC GGGAACCACC ATTGGCGCCA TTGTGCGTAA CGAAGAAGTG CTGATGGCCC ACGACAAGAC AGTGATAGAG CAAGGGGATC ACGTGATTCT GTTCCTCGTG AACAAAAAGT TTGTCGGCGA AGTCGAGAAA CTGTTCCAAC CTAGCGCCTT CTTCTTCTAA
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Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD SDKSRLRALQ DKYDLRVVAG HGAHPDVLKE AGAEDADMLI AVTNSDECNM VACQMAYSLF GTPTKIARIR SEPYLAMRDK LFIDSETKNS EGRPRGGFVI DELIAPEQLV TAYIQRLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD NSYRNIMIAG GGNIGLGLAK RLERTHSVKL IEHKFERAET LSEQLENTTV FCGDASDQEL LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVVGKAI GDIKLPPGTT IGAIVRNEEV LMAHDKTVIE QGDHVILFLV NKKFVGEVEK LFQPSAFFF
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