Gene Shewana3_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0032 
SymboltrkA 
ID4479450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp38658 
End bp40067 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content52% 
IMG OID639724548 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_867683 
Protein GI117918491 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.21174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000689203 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATTA TCATATTAGG TGCGGGTCAA GTCGGGGGAA CCTTGGCCGA AAATTTGGTG 
GGTGAAAATA ACGATATCAC CATAGTCGAT AGCGACAAAT CCAGATTACG CGCCCTGCAG
GATAAATATG ACCTTCGCGT CGTGGCGGGC CACGGTGCCC ACCCCGATGT ACTCAAAGAA
GCTGGCGCCG AAGATGCCGA CATGCTGATT GCTGTGACCA ACAGCGATGA ATGCAACATG
GTCGCCTGCC AAATGGCCTA CAGCCTATTT GGTACACCGA CTAAAATCGC CCGTATTCGC
TCCGAACCTT ATCTGGCGAT GCGTGATAAA TTATTTATCG ACAGTGAAAC CAAAAATAGT
GAGGGGCGCC CTCGCGGTGG TTTTGTGATC GATGAACTTA TCGCACCTGA GCAGTTAGTG
ACCGCTTACA TTCAACGTTT GGTTGAATAT CCAGGGGCAC TGCAAGTGCT CGAATTTGCC
GAAGGCCGTT TAAGTTTGGT TGCAGTTCGT GCCTATTACG GCGGCCCTTT GGTCGGTAAT
GCCTTGGCTG CGCTTCGCGA GCATATGCCA AATATTGATA CCCGGGTGGC GGCGATTTTC
CGCCAAGGTC GCCCTATCAT GCCCCGTGGC ACAACGATTA TCGAAGCCGA TGACGAAGTG
TTTTTCGTGG CCGACAGTCG CCATATCCGC GCGGTGATGA GTGAAATGCA AAAGCTGGAT
AACTCCTACC GCAATATCAT GATTGCTGGC GGTGGTAACA TCGGCTTAGG CCTGGCTAAA
CGCCTCGAAC GCACCCACTC AGTCAAGCTG ATTGAACATA AGTTTGAACG GGCCGAAACG
CTCTCTGAAC AGCTTGAAAA CACTACAGTA TTTTGTGGTG ACGCCTCAGA TCAAGAGTTG
CTGCTCGAAG AACATATCGA CCAAACTGAC GTGTTTATTG CCGTCACCAA CGACGATGAA
GCCAACATCA TGTCCGCCCT GCTCGCTAAA CGCATGGGGG CGAAAAAGGT GATGGTGCTG
ATCCAGCGTG AGGCCTATGT GGATATTGTG CAGGAAGCGA ATATCGATAT CGCGATTTCA
CCCCAGCAGG CGACGATTTC AGCCTTACTG ACCCACATCC GCCAAGGCGA TATCTGTAAC
GTGTATTCCT TACGCCGCGG CGCCGCCGAA GCGATTGAAG CCATTGCCCA TGGCGACTCC
AGCACCTCTA AGGTCGTTGG CAAGGCGATT GGCGATATCA AGCTGCCGCC GGGAACCACC
ATTGGCGCCA TTGTGCGTAA CGAAGAAGTG CTGATGGCCC ACGACAAGAC AGTGATAGAG
CAAGGGGATC ACGTGATTCT GTTCCTCGTG AACAAAAAGT TTGTCGGCGA AGTCGAGAAA
CTGTTCCAAC CTAGCGCCTT CTTCTTCTAA
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNDITIVD SDKSRLRALQ DKYDLRVVAG HGAHPDVLKE 
AGAEDADMLI AVTNSDECNM VACQMAYSLF GTPTKIARIR SEPYLAMRDK LFIDSETKNS
EGRPRGGFVI DELIAPEQLV TAYIQRLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN
ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHIR AVMSEMQKLD
NSYRNIMIAG GGNIGLGLAK RLERTHSVKL IEHKFERAET LSEQLENTTV FCGDASDQEL
LLEEHIDQTD VFIAVTNDDE ANIMSALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS
PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS STSKVVGKAI GDIKLPPGTT
IGAIVRNEEV LMAHDKTVIE QGDHVILFLV NKKFVGEVEK LFQPSAFFF