| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0024 |
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| Symbol | fadB |
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| ID | 4479442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 29437 |
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| End bp | 31587 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639724540 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_867675 |
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| Protein GI | 117918483 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00830663 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000474346 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACACTCGC CTCACTCGAT
GCCGCATTAG ACAGCATTAA ACAACAATCA AACATTCAGG CTTTAGTGCT GACCTCAGGT
AAAGATACCT TTATCGTGGG TGCCGACATT ACTGAATTTT TAGGCTTATT CGCACAGGAT
GATGCGGTAC TGCTCTCTTG GATTGAACAG GCCAACGCCG TATTCAACAA GCTCGAAGAT
TTACCTTTCC CAACCGCTTC AGCGATTAAA GGTTTCGCCC TAGGCGGCGG TTGTGAAACT
ATTCTGGCAA CGGATTTCCG TATCGCCGAC ACCACAGCCA AAATCGGCCT ACCTGAAACC
AAACTGGGCA TTATCCCAGG CTTTGGTGGC ACAGTGCGTT TACCTCGTGT GATTGGTGCG
GATAACGCCC TTGAGTGGAT CACCACGGGT AAAGATCAGC GTCCAGAAGA TGCCTTAAAA
GTCGGTGCTG TCGATGCCGT TGTTGCGCCA GAGGCTTTAG AAGCCGCCGC CATTCAAATG
CTAAAAGATG CAGTAGCAGA AAAGCTTGAT TGGCAAGCCC GTCGCCAACG TAAGATGTCA
CCACTGACCT TACCAAAACT CGAAGCCATG ATGTCTTTTA CTACCGCTAA AGGCATGGTG
TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCGG CAGTCAGCGT TGTTGAACAA
GCTGCGACCA AAGGCCGCAG CGACGCACTG CAAATTGAAC ATCAAGCGTT TATCAAGTTA
GCGAAAACCG ATGTAGCCAA GGCGTTGATC GGTATCTTCT TGAATGACCA ATTAGTCAAA
GGCAAAGCTA AAAAAGCAGG CAAACTCGCC AAAGATGTGA AAAGCGCCGC CGTATTAGGT
GCTGGCATCA TGGGTGGCGG TATCGCTTAC CAAAGCGCCA GCAAAGGCAC GCCAATAGTA
ATGAAGGATA TCGCTCAACC TGCATTAGAT TTAGGTTTAG GCGAAGCCGC TAAACTGTTA
TCTGCGCAAG TTGCTCGCGG CCGCTCTACC CCAGAAAAAA TGGCTAAGGT GCTGAACAAC
ATCACTCCAG CCTTAGACTA TGCTCCAGTT AAACATGCTG ACGTGGTTGT CGAAGCCGTA
GTTGAGCATC CAAAAGTGAA GGCACAAGTA CTGGCGGAAG TTGAACAATA CGTGAGTGAA
GATGCGATTA TCGCCTCTAA CACGTCAACC ATTTCAATCA ACCTGCTCGC GAAAAGCATG
AAGAAGCCTG AGCGTTTCTG CGGTATGCAC TTCTTTAACC CTGTGCACAA AATGCCATTG
GTTGAAGTTA TTCGTGGCGA GCACAGCTCA GAAGAAACCA TCGCATCTGT TGTTGCCTAC
GCCAGCAAAA TGGGTAAAAC CCCAATCGTT GTTAACGATT GCCCGGGTTT CTTCGTTAAC
CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCCTGC TCGCCGAAGG TGGCGACTTT
GCCGCTATCG ATAAAGTGAT GGAAAAACAA TTCGGCTGGC CAATGGGCCC AGCTTACCTG
CTAGACGTTG TCGGCCTAGA CACGGGTCAC CACGCGCAAG CGGTAATGGC CGAAGGCTTC
CCCGATCGTA TGGGCAAATC TGGCAATGAC GCGATTGACG TGATGTTTGA GAACAAGCGT
CTCGGTCAGA AGAATGGTAA AGGTTTCTAC GCTTACTCTG TAGATAGCCG TGGTAAACCA
AAGAAAGATG TCGACCCAAC CAGCTACGAG CTGCTGAAGG CCGCCTTTGG TGAGCAAAAA
GCATTCGATG CGGATGAAAT CATCGCCCGC ACTATGATCC CAATGATTAT CGAAACCGTT
CGCTGTTTAG AAGAAGGCAT TGTGGCATCA CCTGCCGAAG CAGATATGGG CTTGGTCTAT
GGTTTAGGTT TCCCTCCATT CCGTGGTGGT GTATTCCGTT ACTTAGATAC TATGGGCGTA
GCGAACTTTG TCGCCTTAGC TGACAAATAC GCTCACTTAG GTGGTTTGTA TCAAGTCACC
GACGCCATGC GCGCCCTTGC AGCCAACAAC GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQQS NIQALVLTSG
KDTFIVGADI TEFLGLFAQD DAVLLSWIEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRPEDALK
VGAVDAVVAP EALEAAAIQM LKDAVAEKLD WQARRQRKMS PLTLPKLEAM MSFTTAKGMV
FAVAGKHYPA PMAAVSVVEQ AATKGRSDAL QIEHQAFIKL AKTDVAKALI GIFLNDQLVK
GKAKKAGKLA KDVKSAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLGEAAKLL
SAQVARGRST PEKMAKVLNN ITPALDYAPV KHADVVVEAV VEHPKVKAQV LAEVEQYVSE
DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGND AIDVMFENKR LGQKNGKGFY AYSVDSRGKP
KKDVDPTSYE LLKAAFGEQK AFDADEIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRALAANN GSYYQA
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