Gene Shewana3_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0019 
Symbol 
ID4479437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp22574 
End bp25762 
Gene Length3189 bp 
Protein Length1062 aa 
Translation table11 
GC content47% 
IMG OID639724535 
Productamidohydrolase 
Protein accessionYP_867670 
Protein GI117918478 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.34915e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGAAAC CTAAGCTGAC ACCGCTTTAT ATCGCCCTGA TGCTTGGCCT TAGTTCCCAC 
ACAGTACAGG CAACAGACGC CCAAAAAGCC AGTTGGAACG TCAATGCGCC AGCCAATGCC
CCTCTAGAAA AAGTGACCAT AGATGTAACC GAAGGCACTT GGATGAACAT CAGTGTCAGC
CCAGATGGTA AACATTTAGT GTTTGATTTA CTGGGTGATA TTTATCAAAT CCCAGTCACG
GGTGGCGAAG CAAAACCATT AGCCCAAGGC ATCGCCTGGC AAATGCAGCC CGTGTATAGC
CCGGATGGTA AGCATATTGC CTTTACCTCA GATGCGGATG GTGGCGACAA TATTTGGATT
ATGGATGCCG ATGGTAGCAA TCCACGCACA GTCACGACAG AGACCTTTCG TTTACTTAAC
AGTCCTGCGT GGAGCCCTGA TTCGGAATAT TTAGTCGGTC GTAAGCATTT TACCGCCAGT
CGGAGCTTAG GCGCTGGTGA AGTCTGGCTC TACCATGTCG CTGGTGGCGA AGGTGTTAAA
CTCACCGAAC GTCCTAACGA TGAAAAGGAT TTAGGGGAGC CAGCCTATTC ACCCGATGGC
CGTTACATTT ACTTCAGCCA AGATGACACT CCTGGCAAAA CCTTCCATTA TTCTAAGGAT
TCAGTAAACG GCATCTATAA AATCAAGCGT TATGATACCC AAACGGGTGA TATCGAAATC
TTGATCGAAG GAACCGGTGG CGCCATTCGT CCAACACCGA GCCCTGACGG CACCAAACTG
GCGTACATCA AGCGAGATGA TTTCCAATCC TCCTTGTATT TGCTCGATTT GAAATCCGGC
GAAACCACTA AGCTGTATGG CGATTTAGAG CGCGATATGC AAGAGACGTG GGCAATACAC
GGTGTCTATC CCACCATGGC TTGGACCCAA GATAACAAAG ATATTTTTTT CTGGGCTAAG
GGCAAAATCA ATCGCCTGAA TGTTGCCAAT AAAACGGTCA CCAACATTCC CTTCAGCGTA
AAAACCCAGT TAGATGTGCA GCCTTCAGTA CGCTTTAAAC AAGATATTGA TAAGGATGTA
TTCGACGTAA AAATGCTACG AATGACACAA GTTTCACCGG ATGGCAGCAA AGTCGCCTTC
GAAGCATTGG GTAAAATCTG GTTGAAGACA CTTCCCGATG GCAAGATGAC ACGCTTAACT
GAGTTAGGTA ACGACATTGA AGAGCTCTAT CCCCAGTGGT CGCGTGATGG CAAAAATATT
GTCTTCACAA CTTGGAATGA CCAAGACCAG GGCACAGTAC AAGTGATCAG TGCAAAAGGT
GGCAAAGCGA AACAACTTAC CACTGAGACA GGCAAATACG TTGAGCCCAC CTTCTCACCC
AATGGTGAAC TGGTAGTGTA TCGCAAAACC CAAGGTGGAC ACCTTACACC TCGTACTTGG
TCGCAGGAAC CCGGCCTGTA CAAGGTCGAT TTAAAAACCA AACAAAATAA GAAAATTAGC
GCTGAGGGTT ATCAAGCACA ATTCGGCGCT TCGGCCGATC GCATTTTCTT TATGAACACA
GGTGATAACG ACACGCCACA GCTTGCCTCA ATTAACCTAG ATGGGTTTGA TAAACGCGTT
CACTACAGCA GTAAGCATGC AACCGAATTT AGAGTATCTC CCGACGGCGA ACAACTGGCC
TTTGCCGAAC GTTTTAAAGT TTGGGTCACC CCCTTCGCTA AACATGGTGA AACCGTTGAA
ATCGGCCCTA ACGCCAGCAA TCTTCCTGTT ACTCAATTAA GTGTGCGGGC CGGCGAAAGT
ATCAGCTGGA ATAGTAAGAG TAACCAACTC TATTGGACTC TTGGCCCAGA ACTGTACCAA
GCCAATGTGG ATTCCCAGTA TCTTAAAAAG GACGAGCAAG CTAAGCCAAG TATTATCAAC
TTGGGCTTTA CCGAAACGGC CGATGTTCCA CGTGGAACAG TCGCCTTTGT CGGCGGCAAA
GTGATCACCA TGGAAAATGA CCAAGTCATC GATAAAGGTG TGGTCATAGT CAAAGACAAT
CATATTTTAA CCGTTGGCGA TGCAAACACG GCAATTCCAA AGGATGCGCA AGTTATCGAA
ATTAGTGGCA AATCCATTAT GCCAGGCTTG TTTGATGCTC ATGCCCACGG TGCACAGGCC
GATGATGAAA TCGTGCCACA ACAAAACTGG GCACTCTACT CTGGCTTATC CCTAGGCGTG
ACAACCATCC ATGATCCGTC AAACGATACT ACTGAGATAT TTGCTGCCTC TGAACAGCAA
AAGGCTGGTC ACATCGTTGG TCCACGGATT TTCTCCACTG GAACGATTCT TTATGGCGCC
AATGCTCCCG GCTACACCTC ACATATAGAC TCACTCGATG ATGCGAAATT CCATTTAGAA
CGACTCAAAA AAGTCGGCGC CTTTAGTGTT AAAAGCTACA ATCAACCTCG TCGTAATCAA
AGACAACAGG TTATCGCCGC CGCTCGCGAA CTCGAAATGA TGGTTGTGCC TGAGGGTGGC
AGCTTGCTGC AACATAACCT AACCATGGTT GCCGATGGCC ATACAACCGT TGAGCACTCG
TTACCCGTGG CGAGTATTTA TAACGATATT AAACAGTTCT GGAGCCAAAC TAAGGTCGGT
TACACTCCAA CCTTAGTCGT CGCCTACGGC GGTATTTCGG GTGAAAACTA TTGGTACGAT
AAAACCGATG TGTGGGCACA TCCACGTTTG TCTATGTATG TGCCAAGCGA TATTTTGCAG
GCTCGCTCAA TGCGTCGCCC CCATGCACCA GACAGTCACT ACAACCACTT CAATGTTGCT
AAAGTGGCGA ATGAGTTTAA TAAATTAGGC ATTCATCCAA ATATTGGCGC CCACGGTCAG
CGTGAGGGTT TAGCCGCACA TTGGGAAATG TGGATGTTCG CCCAAGGCGG CATGAGCAAT
ATGGATGTAC TGAAAACTGC AACCATCAAC CCTGCCACCA CCTTCGGTCT AGAGCATCAA
CTTGGCTCAA TCAAAACCGG TAAGCTTGCA GACTTAATCG TTATTAATGG CGACCCATTA
GCGGATATTC GAGTCACAGA TAAAGTCACT TATACTATGG TCAATGGTAA GTTGTTTGAT
GCTGAGTCGA TGAACCAGCT GAATGGTAAC AAACAACAGC GTAAGCCATT CTTCTTCGAG
AAAATCTAA
 
Protein sequence
MLKPKLTPLY IALMLGLSSH TVQATDAQKA SWNVNAPANA PLEKVTIDVT EGTWMNISVS 
PDGKHLVFDL LGDIYQIPVT GGEAKPLAQG IAWQMQPVYS PDGKHIAFTS DADGGDNIWI
MDADGSNPRT VTTETFRLLN SPAWSPDSEY LVGRKHFTAS RSLGAGEVWL YHVAGGEGVK
LTERPNDEKD LGEPAYSPDG RYIYFSQDDT PGKTFHYSKD SVNGIYKIKR YDTQTGDIEI
LIEGTGGAIR PTPSPDGTKL AYIKRDDFQS SLYLLDLKSG ETTKLYGDLE RDMQETWAIH
GVYPTMAWTQ DNKDIFFWAK GKINRLNVAN KTVTNIPFSV KTQLDVQPSV RFKQDIDKDV
FDVKMLRMTQ VSPDGSKVAF EALGKIWLKT LPDGKMTRLT ELGNDIEELY PQWSRDGKNI
VFTTWNDQDQ GTVQVISAKG GKAKQLTTET GKYVEPTFSP NGELVVYRKT QGGHLTPRTW
SQEPGLYKVD LKTKQNKKIS AEGYQAQFGA SADRIFFMNT GDNDTPQLAS INLDGFDKRV
HYSSKHATEF RVSPDGEQLA FAERFKVWVT PFAKHGETVE IGPNASNLPV TQLSVRAGES
ISWNSKSNQL YWTLGPELYQ ANVDSQYLKK DEQAKPSIIN LGFTETADVP RGTVAFVGGK
VITMENDQVI DKGVVIVKDN HILTVGDANT AIPKDAQVIE ISGKSIMPGL FDAHAHGAQA
DDEIVPQQNW ALYSGLSLGV TTIHDPSNDT TEIFAASEQQ KAGHIVGPRI FSTGTILYGA
NAPGYTSHID SLDDAKFHLE RLKKVGAFSV KSYNQPRRNQ RQQVIAAARE LEMMVVPEGG
SLLQHNLTMV ADGHTTVEHS LPVASIYNDI KQFWSQTKVG YTPTLVVAYG GISGENYWYD
KTDVWAHPRL SMYVPSDILQ ARSMRRPHAP DSHYNHFNVA KVANEFNKLG IHPNIGAHGQ
REGLAAHWEM WMFAQGGMSN MDVLKTATIN PATTFGLEHQ LGSIKTGKLA DLIVINGDPL
ADIRVTDKVT YTMVNGKLFD AESMNQLNGN KQQRKPFFFE KI