Gene Shewana3_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0012 
Symbol 
ID4477451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp13416 
End bp15833 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content49% 
IMG OID639724528 
ProductDNA gyrase subunit B 
Protein accessionYP_867663 
Protein GI117918471 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000257607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATTAAGGTCC TTAAGGGCCT TGATGCAGTA 
CGTAAGAGAC CTGGGATGTA TATTGGTGAC ACCGACGACG GTACGGGTCT ACATCATATG
GTGTTCGAAG TAGTCGATAA CTCTATCGAT GAAGCCTTAG CCGGCCATTG TACTGATATC
ACTATTACTA TCCATGTGGA TGGCTCGGTC TCCGTTCGCG ACGACGGCCG TGGTATTCCT
GTGGCGATTC ACCCGGAAGA AGGCGTGTCT GCCGCCGAGG TGATCATGAC CGTATTGCAC
GCGGGCGGTA AGTTCGACGA TAACTCTTAT AAAGTGTCAG GTGGTCTGCA CGGCGTGGGT
GTGTCGGTAG TTAACGCGCT GTCTAAAAAG CTGCAGTTAA CCATTCGCCG TGAAGGTAAA
GTCCACGAGC AGTTTTATAC CCACGGTGTT CCTGACGAGC CAATCAAAGT GATCGGCGAT
GCGACGAAAA CCGGTACCGA AATCCGTTTC TGGCCAAGTG AAGAAACCTT CAGCGATGTT
GAGTTCCACT TCGAGATTCT GGCAAAGCGC GTGCGCGAAC TGTCGTTCCT CAACTCAGGC
GTGGGTATCC GCTTAGTCGA CGAGCGTGAC AATAAGAATG AATTCTTTAA ATACGAAGGT
GGTATCAGCG CATTCGTTGA TTACCTGAAC CGTAATAAAA CGCCAGTAAA CAAAGACGTA
TTCCACTTTA TGCAAGAGCG TGACGACGGT ATTACCGTTG AAGTGGCGAT GCAGTGGAAC
GATGGTTATC AAGAAAGCAT TTTCTGTTTT ACCAACAACA TTCCACAGCG TGATGGTGGT
ACTCACTTAG CGGGTTTCCG TAGTGCGTTG ACACGTAACC TCAACAACTA CATGGAAAAC
GAAGGCTATA ACAAGAAAGG CAAAACTAAC GCGACTGGCG ATGACGCCCG CGAAGGTTTA
ACGGCCGTGA TTTCAGTTAA AGTGCCTGAT CCTAAGTTCA GCTCGCAAAC CAAAGACAAG
TTAGTGTCTA GTGAAGTGAA AGCCGCGGTT GAACAAACCA TGGGTGAAAA GCTAAACGAC
TATCTGCTGG AAAACCCTGC CGATGCTAAG TTAATCGTCG GTAAGATTGT CGATGCGGCC
CGTGCCCGTG AAGCGGCACG TAAAGCCCGT GAAATGACCC GTCGTAAAGG CGCACTCGAT
TTAGGTGGTT TGCCAGGTAA GCTGGCGGAT TGCCAAGAGA AAGACCCTGG TCTTTCAGAA
ATCTACATAG TGGAAGGGGA CTCTGCTGGC GGTAGCGCTA AGCAGGGACG TAACCGTAAG
AACCAAGCGA TTCTGCCACT GAAAGGTAAA ATCTTAAACG TTGAGAAAGC GCGTTTCGAT
AAAATGCTTT CTTCTCAAGA GGTTGCCACG CTAATTACTG CACTTGGCTG TGGTATTGGT
CGTGACGAAT ACAACCCGGA TAAGACGCGT TACCACAACA TCATCATCAT GACGGATGCT
GACGTCGACG GCTCGCATAT TCGTACCTTG CTGTTGACCT TCTTCTTCCG CCAAATGCCT
GAACTGATTG AACGTGGTTA TGTGTATATT GCTCAGCCGC CTTTATTCAA AGTGAAGAAA
GGTAAGCAAG AACAATATCT CAAAGACGAA GCGGCACTGA CTCAGTATCT GACCACTCAA
GCGTTAGATG GTACTAGTAT TTATCCATCT CAAGGTGCGC CTGGTATGTC GGGTGAGCCA
TTAGAGCGTT TAGTGACTCA ATACCGCGAA GTGGAAGCGA TTGTGGCCCG TTTAGAGCAA
CGTTACCCTA CTCAGATCAC CAACCGCATG CTTTATCATC CAATGATCAA CAACGAAATG
TTGGCGGATG AAGGCAAGAT GAAGGAATGT ATCGACGCCT TTATCCATGA GCTGGTGGAA
TTAGAAAACA GCGGTGTGTT GTATTCTGGT GAGCCTGTGC TCGATCCTGA GCGTAAAGTG
TATCTGCCGA AGATCACTAT CCGTAAACAT GGTATCGATA CACACTACCT GTTCAGCTAC
GACTTCTTCC AATCAACCGA CTACCAACGC ATTGGTAAGT TAGGTGCGGC GCTTGAAGGC
CTGATTGAAG TCGGTGGTTA TGTGCAACGT GGCGACCGTG TGAAGGAAGT GGGTAGCTTC
ATTGAAGCGT TAGATTGGAC CATCGGCGAA GCCAAACGTG GCCTCTACAT CCAACGCTAT
AAAGGATTGG GTGAGATGAA CCCTGAGCAA TTGTGGGAAA CCACAATGGA TCCTGAATCT
CGCCGCATGC TGCAAGTGAC GATTGATGAT GCCGTTGGTG CGGATCAGCT GTTTACTTGT
TTGATGGGCG ACCAAGTTGA ACCACGCCGT GACTTTATCG AAGCCAACGC GCTGAACGTG
GCTAACTTAG ATGTTTAA
 
Protein sequence
MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCTDI 
TITIHVDGSV SVRDDGRGIP VAIHPEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSKK LQLTIRREGK VHEQFYTHGV PDEPIKVIGD ATKTGTEIRF WPSEETFSDV
EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV
FHFMQERDDG ITVEVAMQWN DGYQESIFCF TNNIPQRDGG THLAGFRSAL TRNLNNYMEN
EGYNKKGKTN ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKAAV EQTMGEKLND
YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE
IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK
GKQEQYLKDE AALTQYLTTQ ALDGTSIYPS QGAPGMSGEP LERLVTQYRE VEAIVARLEQ
RYPTQITNRM LYHPMINNEM LADEGKMKEC IDAFIHELVE LENSGVLYSG EPVLDPERKV
YLPKITIRKH GIDTHYLFSY DFFQSTDYQR IGKLGAALEG LIEVGGYVQR GDRVKEVGSF
IEALDWTIGE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC
LMGDQVEPRR DFIEANALNV ANLDV