Gene Shewana3_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0003 
Symbol 
ID4477442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3107 
End bp3547 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content48% 
IMG OID639724519 
Productflavodoxin 
Protein accessionYP_867654 
Protein GI117918462 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.664218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000119397 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAAGA TCGCGATATT AGTCGGCACC ACCCTCGGCA GCAGTGAATA TATAGCGGAT 
GAAATGCAGG CCCAGCTCAC TCCATTAGGC CATGAAGTCG ATACCTTTTT GAGTCCAACA
TTGGATGAAT TGCAATCATA TCCCCTTTGG ATCATCGTTT CGTCGACCCA TGGCGCCGGC
GATCTGCCCG ACAATTTGCA GCCATTTAAT AAAGAACTGC TGCTAAACAC ACCGGATCTG
ACCCAAGTTC AGTTCGCCTT ATGTGCGATT GGCGACTCAA GTTATGACAC CTTTTGCCAA
GGCCCAGAAA AGTTAGTTGA AGCGCTGGAA TACAGCGGGG CAAAAGTCAT TGTGGATAAG
ATCCAGATCG ATGTACAACA GGATCCAGTG CCAGAAGACC CAGCTTTAGC GTGGTTAGCA
CAATGGCAAG ATCAAATTTA A
 
Protein sequence
MTKIAILVGT TLGSSEYIAD EMQAQLTPLG HEVDTFLSPT LDELQSYPLW IIVSSTHGAG 
DLPDNLQPFN KELLLNTPDL TQVQFALCAI GDSSYDTFCQ GPEKLVEALE YSGAKVIVDK
IQIDVQQDPV PEDPALAWLA QWQDQI