Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0003 |
Symbol | |
ID | 4477442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 3107 |
End bp | 3547 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639724519 |
Product | flavodoxin |
Protein accession | YP_867654 |
Protein GI | 117918462 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.664218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000119397 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAGA TCGCGATATT AGTCGGCACC ACCCTCGGCA GCAGTGAATA TATAGCGGAT GAAATGCAGG CCCAGCTCAC TCCATTAGGC CATGAAGTCG ATACCTTTTT GAGTCCAACA TTGGATGAAT TGCAATCATA TCCCCTTTGG ATCATCGTTT CGTCGACCCA TGGCGCCGGC GATCTGCCCG ACAATTTGCA GCCATTTAAT AAAGAACTGC TGCTAAACAC ACCGGATCTG ACCCAAGTTC AGTTCGCCTT ATGTGCGATT GGCGACTCAA GTTATGACAC CTTTTGCCAA GGCCCAGAAA AGTTAGTTGA AGCGCTGGAA TACAGCGGGG CAAAAGTCAT TGTGGATAAG ATCCAGATCG ATGTACAACA GGATCCAGTG CCAGAAGACC CAGCTTTAGC GTGGTTAGCA CAATGGCAAG ATCAAATTTA A
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Protein sequence | MTKIAILVGT TLGSSEYIAD EMQAQLTPLG HEVDTFLSPT LDELQSYPLW IIVSSTHGAG DLPDNLQPFN KELLLNTPDL TQVQFALCAI GDSSYDTFCQ GPEKLVEALE YSGAKVIVDK IQIDVQQDPV PEDPALAWLA QWQDQI
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